HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.2 nTPM
HPA:61.2 nTPM
GTEx:58.5 nTPM
FANTOM5:56.6 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:70.1 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051409Antibody CAB031904
Glial cells Not detectedNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.2
Sample id Sample description nTPM
Hippocampus
nTPM: 51.5
1855 Male, age 76, left hemisphere 65.7
2148 Female, age 91, left hemisphere 52.5
2621 Female, age 67, right hemisphere 50.3
1898 Male, age 80, left hemisphere 48.8
2529 Female, age 94, left hemisphere 46.1
1911 Female, age 85, right hemisphere 45.5
Dentate gyrus
nTPM: 56.9
2531 Female, age 67, both hemispheres 64.5
1927 Female, age 91, both hemispheres 61.9
2010 Male, age 76, both hemispheres 61.6
2246 Female, age 85, both hemispheres 55.0
2530 Female, age 94, left hemisphere 50.3
2528 Male, age 74, both hemispheres 47.9
Entorhinal gyrus
nTPM: 48.4
2613 Female, age 94, left hemisphere 50.5
2764 Male, age 80, right hemisphere 50.4
1787 Male, age 76, left hemisphere 49.8
1938 Female, age 85, left hemisphere 49.2
2686 Male, age 75, right hemisphere 46.6
2117 Female, age 91, right hemisphere 43.9
Hippocampus, CA1
nTPM: 61.2
2045 Male, age 76, both hemispheres 93.6
2749 Male, age 80, left hemisphere 69.9
1873 Female, age 85, both hemispheres 55.7
2527 Male, age 74, both hemispheres 45.0
2082 Female, age 91, right hemisphere 42.0
Hippocampus, CA2
nTPM: 48.5
1892 Male, age 76, both hemispheres 66.0
1963 Male, age 80, left hemisphere 49.1
1940 Female, age 85, left hemisphere 46.5
2437 Female, age 94, left hemisphere 45.8
2113 Female, age 91, right hemisphere 42.0
2249 Male, age 74, both hemispheres 41.8
Hippocampus, CA3
nTPM: 59.3
2620 Female, age 94, left hemisphere 76.9
1867 Male, age 76, both hemispheres 71.4
2137 Male, age 80, left hemisphere 66.2
2861 Female, age 67, both hemispheres 53.5
1891 Female, age 85, both hemispheres 48.1
2436 Male, age 74, both hemispheres 39.8
Parahippocampal cortex
nTPM: 47.1
1850 Male, age 80, both hemispheres 53.3
2018 Male, age 76, both hemispheres 50.0
2622 Female, age 67, right hemisphere 48.5
1990 Female, age 91, right hemisphere 47.1
2693 Female, age 94, both hemispheres 46.9
2532 Female, age 72, left hemisphere 46.8
1933 Female, age 85, both hemispheres 46.3
2245 Female, age 91, both hemispheres 46.2
2250 Female, age 67, right hemisphere 44.8
2692 Male, age 74, both hemispheres 41.4
Perirhinal gyrus
nTPM: 52.2
1794 Male, age 80, right hemisphere 56.2
1847 Female, age 91, left hemisphere 55.5
2521 Female, age 94, right hemisphere 51.3
1841 Female, age 85, right hemisphere 49.8
2848 Male, age 76, right hemisphere 48.2
Subiculum
nTPM: 45.7
2729 Female, age 91, right hemisphere 49.5
1901 Male, age 80, both hemispheres 48.2
1977 Female, age 85, both hemispheres 47.5
2042 Male, age 76, both hemispheres 46.6
2438 Female, age 94, left hemisphere 41.7
2619 Male, age 74, both hemispheres 41.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.5
Samples: 197

Max nTPM: 186.0
Min nTPM: 8.6
Std nTPM: 30.4
Median nTPM: 55.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 186.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 139.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 137.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 133.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 131.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 125.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 124.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 121.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 118.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 115.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 114.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.6
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 44.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 32.1
Min nTPM: 22.9
Sample A Female 31.7
Sample B Female 30.2
Sample C Male 32.1
Sample D Male 22.9
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.8
Sample A Female 27.5
Sample B Female 25.5
Sample C Male 24.0
Sample D Male 22.8
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 34.8
Min nTPM: 22.9
Sample A Female 34.8
Sample B Female 22.9
Sample C Male 27.3
Sample D Male 24.5
Ventral hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 36.2
Min nTPM: 20.5
Sample A Female 21.7
Sample B Female 20.5
Sample C Male 26.6
Sample D Male 36.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 82.5
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 82.5
Sample C Female 68.8
Sample D Female 67.6
Hippocampal formation
nTPM: 40.5
Samples: 4

Max nTPM: 52.9
Min nTPM: 29.6
Sample A Male 52.9
Sample B Male 35.1
Sample C Female 29.6
Sample D Female 44.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70445646 Antisense, RP_050614_04_C07, Mouse strain C57BL/6J (56 days, male) 2.1

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