HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:74.1 nTPM
HPA:74.1 nTPM
GTEx:62.8 nTPM
FANTOM5:101.5 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:40.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010029
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.1
Sample id Sample description nTPM
Hippocampus
nTPM: 72.8
1898 Male, age 80, left hemisphere 78.5
1855 Male, age 76, left hemisphere 74.1
1911 Female, age 85, right hemisphere 72.9
2529 Female, age 94, left hemisphere 71.1
2621 Female, age 67, right hemisphere 70.7
2148 Female, age 91, left hemisphere 69.6
Dentate gyrus
nTPM: 71.0
2010 Male, age 76, both hemispheres 76.1
1927 Female, age 91, both hemispheres 73.2
2528 Male, age 74, both hemispheres 71.8
2246 Female, age 85, both hemispheres 70.3
2530 Female, age 94, left hemisphere 69.4
2531 Female, age 67, both hemispheres 65.2
Entorhinal gyrus
nTPM: 71.0
2117 Female, age 91, right hemisphere 74.6
1938 Female, age 85, left hemisphere 73.8
1787 Male, age 76, left hemisphere 71.4
2764 Male, age 80, right hemisphere 70.8
2686 Male, age 75, right hemisphere 68.9
2613 Female, age 94, left hemisphere 66.7
Hippocampus, CA1
nTPM: 74.1
2749 Male, age 80, left hemisphere 78.6
2045 Male, age 76, both hemispheres 75.1
1873 Female, age 85, both hemispheres 73.6
2527 Male, age 74, both hemispheres 73.4
2082 Female, age 91, right hemisphere 69.7
Hippocampus, CA2
nTPM: 73.4
2249 Male, age 74, both hemispheres 77.4
1892 Male, age 76, both hemispheres 77.2
1963 Male, age 80, left hemisphere 76.1
1940 Female, age 85, left hemisphere 70.9
2113 Female, age 91, right hemisphere 69.7
2437 Female, age 94, left hemisphere 69.0
Hippocampus, CA3
nTPM: 72.2
1867 Male, age 76, both hemispheres 77.5
2436 Male, age 74, both hemispheres 76.8
1891 Female, age 85, both hemispheres 75.4
2137 Male, age 80, left hemisphere 71.7
2620 Female, age 94, left hemisphere 67.8
2861 Female, age 67, both hemispheres 64.2
Parahippocampal cortex
nTPM: 71.5
2018 Male, age 76, both hemispheres 75.5
1850 Male, age 80, both hemispheres 75.1
1933 Female, age 85, both hemispheres 74.6
1990 Female, age 91, right hemisphere 73.4
2250 Female, age 67, right hemisphere 73.1
2532 Female, age 72, left hemisphere 70.3
2693 Female, age 94, both hemispheres 69.9
2692 Male, age 74, both hemispheres 69.8
2245 Female, age 91, both hemispheres 67.8
2622 Female, age 67, right hemisphere 65.8
Perirhinal gyrus
nTPM: 73.8
1794 Male, age 80, right hemisphere 75.8
1847 Female, age 91, left hemisphere 75.6
1841 Female, age 85, right hemisphere 75.4
2521 Female, age 94, right hemisphere 71.5
2848 Male, age 76, right hemisphere 70.6
Subiculum
nTPM: 73.3
1901 Male, age 80, both hemispheres 74.9
1977 Female, age 85, both hemispheres 74.7
2042 Male, age 76, both hemispheres 74.1
2438 Female, age 94, left hemisphere 74.0
2729 Female, age 91, right hemisphere 72.1
2619 Male, age 74, both hemispheres 70.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.8
Samples: 197

Max nTPM: 116.7
Min nTPM: 34.2
Std nTPM: 11.0
Median nTPM: 61.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 116.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 102.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 90.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 89.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 87.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 86.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 86.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 82.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 82.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 81.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 80.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.5
FF:10169-103B7 60 years, female 124.5
FF:10153-102I9 76 years, female 78.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.4
Samples: 4

Max nTPM: 57.8
Min nTPM: 43.4
Sample A Female 57.8
Sample B Female 54.3
Sample C Male 50.2
Sample D Male 43.4
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 63.2
Min nTPM: 45.7
Sample A Female 48.7
Sample B Female 63.2
Sample C Male 51.7
Sample D Male 45.7
Subiculum
nTPM: 47.3
Samples: 4

Max nTPM: 54.9
Min nTPM: 43.6
Sample A Female 54.9
Sample B Female 44.6
Sample C Male 43.6
Sample D Male 46.1
Ventral hippocampus
nTPM: 46.4
Samples: 4

Max nTPM: 51.9
Min nTPM: 39.0
Sample A Female 48.3
Sample B Female 39.0
Sample C Male 46.4
Sample D Male 51.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.2
Samples: 4

Max nTPM: 42.9
Min nTPM: 38.9
Sample A Male 39.7
Sample B Male 39.2
Sample C Female 38.9
Sample D Female 42.9
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 42.3
Min nTPM: 35.5
Sample A Male 39.4
Sample B Male 37.0
Sample C Female 42.3
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
71493129 Antisense, RP_050913_02_C01, Mouse strain C57BL/6J (56 days, male) 0.7

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