HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:7.9 nTPM
FANTOM5:78.4 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:55.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1898 Male, age 80, left hemisphere 14.9
1911 Female, age 85, right hemisphere 14.4
1855 Male, age 76, left hemisphere 14.1
2529 Female, age 94, left hemisphere 14.0
2621 Female, age 67, right hemisphere 13.2
2148 Female, age 91, left hemisphere 13.0
Dentate gyrus
nTPM: 14.0
2010 Male, age 76, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.6
1927 Female, age 91, both hemispheres 13.9
2528 Male, age 74, both hemispheres 13.9
2246 Female, age 85, both hemispheres 13.7
2531 Female, age 67, both hemispheres 13.1
Entorhinal gyrus
nTPM: 13.5
2117 Female, age 91, right hemisphere 15.1
1787 Male, age 76, left hemisphere 13.8
1938 Female, age 85, left hemisphere 13.4
2764 Male, age 80, right hemisphere 13.3
2613 Female, age 94, left hemisphere 12.9
2686 Male, age 75, right hemisphere 12.7
Hippocampus, CA1
nTPM: 14.3
1873 Female, age 85, both hemispheres 14.6
2749 Male, age 80, left hemisphere 14.6
2045 Male, age 76, both hemispheres 14.5
2527 Male, age 74, both hemispheres 14.2
2082 Female, age 91, right hemisphere 13.4
Hippocampus, CA2
nTPM: 14.1
1892 Male, age 76, both hemispheres 14.3
2249 Male, age 74, both hemispheres 14.3
1963 Male, age 80, left hemisphere 14.1
2113 Female, age 91, right hemisphere 14.0
1940 Female, age 85, left hemisphere 13.8
2437 Female, age 94, left hemisphere 13.7
Hippocampus, CA3
nTPM: 13.7
1867 Male, age 76, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.7
1891 Female, age 85, both hemispheres 14.2
2137 Male, age 80, left hemisphere 13.8
2620 Female, age 94, left hemisphere 12.4
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 13.7
2250 Female, age 67, right hemisphere 15.0
2018 Male, age 76, both hemispheres 14.7
1850 Male, age 80, both hemispheres 14.5
1990 Female, age 91, right hemisphere 14.3
1933 Female, age 85, both hemispheres 13.7
2245 Female, age 91, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.2
2532 Female, age 72, left hemisphere 13.0
2692 Male, age 74, both hemispheres 13.0
2622 Female, age 67, right hemisphere 12.3
Perirhinal gyrus
nTPM: 14.1
2521 Female, age 94, right hemisphere 14.6
1794 Male, age 80, right hemisphere 14.1
1841 Female, age 85, right hemisphere 14.1
1847 Female, age 91, left hemisphere 13.8
2848 Male, age 76, right hemisphere 13.8
Subiculum
nTPM: 14.2
2438 Female, age 94, left hemisphere 15.8
2042 Male, age 76, both hemispheres 14.8
1977 Female, age 85, both hemispheres 14.1
1901 Male, age 80, both hemispheres 14.0
2729 Female, age 91, right hemisphere 13.7
2619 Male, age 74, both hemispheres 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.9
Samples: 197

Max nTPM: 19.8
Min nTPM: 0.0
Std nTPM: 3.0
Median nTPM: 7.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 14.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 14.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 13.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 12.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 12.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 12.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 12.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 12.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 11.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.4
FF:10169-103B7 60 years, female 95.2
FF:10153-102I9 76 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 43.6
Min nTPM: 22.5
Sample A Female 43.6
Sample B Female 33.7
Sample C Male 23.8
Sample D Male 22.5
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.6
Sample A Female 20.8
Sample B Female 22.3
Sample C Male 17.8
Sample D Male 14.6
Subiculum
nTPM: 18.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 15.8
Sample A Female 23.6
Sample B Female 17.9
Sample C Male 15.8
Sample D Male 16.1
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 37.8
Min nTPM: 17.7
Sample A Female 24.2
Sample B Female 17.7
Sample C Male 20.2
Sample D Male 37.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 48.9
Sample A Male 51.6
Sample B Male 53.0
Sample C Female 57.7
Sample D Female 48.9
Hippocampal formation
nTPM: 55.2
Samples: 4

Max nTPM: 59.9
Min nTPM: 51.2
Sample A Male 59.9
Sample B Male 51.2
Sample C Female 56.2
Sample D Female 53.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68158073 Antisense, RP_041116_02_G02, Mouse strain C57BL/6J (56 days, male) 1.1

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