HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.5 nTPM
HPA:23.5 nTPM
GTEx:16.9 nTPM
FANTOM5:92.9 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:71.4 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040737Antibody HPA040942
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.5
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2529 Female, age 94, left hemisphere 22.0
2148 Female, age 91, left hemisphere 21.3
1911 Female, age 85, right hemisphere 18.7
1898 Male, age 80, left hemisphere 18.5
1855 Male, age 76, left hemisphere 17.6
2621 Female, age 67, right hemisphere 17.0
Dentate gyrus
nTPM: 18.6
2528 Male, age 74, both hemispheres 21.9
2246 Female, age 85, both hemispheres 21.3
2010 Male, age 76, both hemispheres 19.1
1927 Female, age 91, both hemispheres 17.6
2531 Female, age 67, both hemispheres 16.9
2530 Female, age 94, left hemisphere 15.1
Entorhinal gyrus
nTPM: 21.2
1787 Male, age 76, left hemisphere 23.3
1938 Female, age 85, left hemisphere 22.7
2613 Female, age 94, left hemisphere 21.5
2686 Male, age 75, right hemisphere 21.2
2764 Male, age 80, right hemisphere 19.8
2117 Female, age 91, right hemisphere 18.6
Hippocampus, CA1
nTPM: 19.2
2527 Male, age 74, both hemispheres 22.9
2749 Male, age 80, left hemisphere 19.4
1873 Female, age 85, both hemispheres 18.1
2045 Male, age 76, both hemispheres 17.9
2082 Female, age 91, right hemisphere 17.6
Hippocampus, CA2
nTPM: 18.5
1940 Female, age 85, left hemisphere 20.3
2113 Female, age 91, right hemisphere 19.5
1892 Male, age 76, both hemispheres 18.8
2249 Male, age 74, both hemispheres 18.3
1963 Male, age 80, left hemisphere 17.6
2437 Female, age 94, left hemisphere 16.3
Hippocampus, CA3
nTPM: 19.2
2137 Male, age 80, left hemisphere 21.3
1891 Female, age 85, both hemispheres 21.1
1867 Male, age 76, both hemispheres 19.7
2620 Female, age 94, left hemisphere 19.3
2861 Female, age 67, both hemispheres 18.2
2436 Male, age 74, both hemispheres 15.2
Parahippocampal cortex
nTPM: 21.7
1850 Male, age 80, both hemispheres 26.6
2622 Female, age 67, right hemisphere 23.8
2018 Male, age 76, both hemispheres 23.3
2692 Male, age 74, both hemispheres 22.8
1933 Female, age 85, both hemispheres 22.0
2693 Female, age 94, both hemispheres 21.2
1990 Female, age 91, right hemisphere 20.2
2532 Female, age 72, left hemisphere 19.8
2245 Female, age 91, both hemispheres 18.7
2250 Female, age 67, right hemisphere 18.6
Perirhinal gyrus
nTPM: 23.5
1794 Male, age 80, right hemisphere 25.3
1841 Female, age 85, right hemisphere 23.5
1847 Female, age 91, left hemisphere 23.1
2848 Male, age 76, right hemisphere 23.1
2521 Female, age 94, right hemisphere 22.5
Subiculum
nTPM: 20.3
2619 Male, age 74, both hemispheres 23.4
1977 Female, age 85, both hemispheres 22.1
2729 Female, age 91, right hemisphere 20.7
2438 Female, age 94, left hemisphere 20.0
1901 Male, age 80, both hemispheres 18.0
2042 Male, age 76, both hemispheres 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 30.0
Min nTPM: 8.6
Std nTPM: 3.8
Median nTPM: 16.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 30.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 30.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 27.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 27.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 26.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 25.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 24.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.9
FF:10153-102I9 76 years, female 117.8
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.3
Sample A Female 23.3
Sample B Female 21.2
Sample C Male 18.3
Sample D Male 21.8
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.4
Min nTPM: 22.9
Sample A Female 26.4
Sample B Female 26.0
Sample C Male 24.9
Sample D Male 22.9
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 18.4
Sample A Female 27.2
Sample B Female 19.6
Sample C Male 20.6
Sample D Male 18.4
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.6
Sample A Female 20.4
Sample B Female 17.6
Sample C Male 23.7
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.4
Samples: 4

Max nTPM: 74.5
Min nTPM: 68.3
Sample A Male 74.5
Sample B Male 68.3
Sample C Female 71.6
Sample D Female 71.2
Hippocampal formation
nTPM: 60.1
Samples: 4

Max nTPM: 62.3
Min nTPM: 56.6
Sample A Male 61.4
Sample B Male 62.3
Sample C Female 60.2
Sample D Female 56.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
73573199 Antisense, RP_051121_03_E02, Mouse strain C57BL/6J (56 days, male) 3.9

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