HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:167.5 nTPM
HPA:167.5 nTPM
GTEx:190.7 nTPM
FANTOM5:319.6 Scaled Tags Per Million
Pig:132.9 nTPM
Mouse:467.1 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 167.5
Sample id Sample description nTPM
Hippocampus
nTPM: 118.5
1898 Male, age 80, left hemisphere 163.9
2621 Female, age 67, right hemisphere 123.9
1911 Female, age 85, right hemisphere 116.3
1855 Male, age 76, left hemisphere 115.6
2148 Female, age 91, left hemisphere 101.4
2529 Female, age 94, left hemisphere 89.8
Dentate gyrus
nTPM: 120.3
1927 Female, age 91, both hemispheres 181.1
2010 Male, age 76, both hemispheres 128.2
2530 Female, age 94, left hemisphere 119.4
2246 Female, age 85, both hemispheres 104.7
2531 Female, age 67, both hemispheres 100.7
2528 Male, age 74, both hemispheres 88.0
Entorhinal gyrus
nTPM: 127.0
2613 Female, age 94, left hemisphere 161.8
2764 Male, age 80, right hemisphere 145.9
1938 Female, age 85, left hemisphere 145.4
1787 Male, age 76, left hemisphere 117.6
2686 Male, age 75, right hemisphere 102.8
2117 Female, age 91, right hemisphere 88.4
Hippocampus, CA1
nTPM: 148.2
2749 Male, age 80, left hemisphere 244.9
1873 Female, age 85, both hemispheres 147.9
2045 Male, age 76, both hemispheres 147.2
2082 Female, age 91, right hemisphere 102.5
2527 Male, age 74, both hemispheres 98.3
Hippocampus, CA2
nTPM: 124.8
1892 Male, age 76, both hemispheres 182.3
1963 Male, age 80, left hemisphere 178.7
2437 Female, age 94, left hemisphere 110.2
1940 Female, age 85, left hemisphere 104.1
2113 Female, age 91, right hemisphere 93.8
2249 Male, age 74, both hemispheres 79.6
Hippocampus, CA3
nTPM: 132.1
2137 Male, age 80, left hemisphere 183.5
2620 Female, age 94, left hemisphere 161.4
1867 Male, age 76, both hemispheres 150.1
1891 Female, age 85, both hemispheres 113.1
2861 Female, age 67, both hemispheres 106.7
2436 Male, age 74, both hemispheres 77.7
Parahippocampal cortex
nTPM: 118.3
1850 Male, age 80, both hemispheres 158.0
1933 Female, age 85, both hemispheres 142.1
2245 Female, age 91, both hemispheres 134.9
1990 Female, age 91, right hemisphere 122.0
2693 Female, age 94, both hemispheres 114.3
2532 Female, age 72, left hemisphere 113.9
2018 Male, age 76, both hemispheres 113.3
2250 Female, age 67, right hemisphere 110.6
2622 Female, age 67, right hemisphere 94.0
2692 Male, age 74, both hemispheres 80.4
Perirhinal gyrus
nTPM: 167.5
1847 Female, age 91, left hemisphere 220.8
1841 Female, age 85, right hemisphere 173.3
1794 Male, age 80, right hemisphere 170.9
2521 Female, age 94, right hemisphere 139.4
2848 Male, age 76, right hemisphere 133.1
Subiculum
nTPM: 104.5
1977 Female, age 85, both hemispheres 133.4
1901 Male, age 80, both hemispheres 132.9
2438 Female, age 94, left hemisphere 101.6
2042 Male, age 76, both hemispheres 93.3
2619 Male, age 74, both hemispheres 84.1
2729 Female, age 91, right hemisphere 81.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 190.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 190.7
Samples: 197

Max nTPM: 418.7
Min nTPM: 66.3
Std nTPM: 85.0
Median nTPM: 175.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 418.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 416.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 385.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 380.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 367.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 365.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 357.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 356.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 354.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 354.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 353.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 319.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 319.6
FF:10169-103B7 60 years, female 382.9
FF:10153-102I9 76 years, female 256.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 130.4
Samples: 4

Max nTPM: 157.6
Min nTPM: 103.3
Sample A Female 157.6
Sample B Female 145.2
Sample C Male 103.3
Sample D Male 115.6
Entorhinal cortex
nTPM: 132.9
Samples: 4

Max nTPM: 144.3
Min nTPM: 116.3
Sample A Female 144.3
Sample B Female 129.3
Sample C Male 141.8
Sample D Male 116.3
Subiculum
nTPM: 120.1
Samples: 4

Max nTPM: 148.2
Min nTPM: 103.7
Sample A Female 148.2
Sample B Female 111.4
Sample C Male 117.0
Sample D Male 103.7
Ventral hippocampus
nTPM: 132.4
Samples: 4

Max nTPM: 170.1
Min nTPM: 93.9
Sample A Female 117.3
Sample B Female 93.9
Sample C Male 148.4
Sample D Male 170.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 467.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 429.9
Samples: 4

Max nTPM: 508.8
Min nTPM: 395.4
Sample A Male 410.2
Sample B Male 395.4
Sample C Female 405.2
Sample D Female 508.8
Hippocampal formation
nTPM: 467.1
Samples: 4

Max nTPM: 539.1
Min nTPM: 394.9
Sample A Male 454.2
Sample B Male 480.1
Sample C Female 539.1
Sample D Female 394.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
655120 Antisense, RP_040922_01_A09, Mouse strain C57BL/6J (56 days, male) 23.2
110 Antisense, RP_Baylor_102634, Mouse strain C57BL/6J (56 days, male) 11.0
111 Antisense, RP_Baylor_102634, Mouse strain C57BL/6J (56 days, male) 8.5
112 Sense, RPS_Baylor_36952, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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