We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ARF3
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • ARF3
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:70.2 nTPM
HPA:70.2 nTPM
GTEx:112.3 nTPM
FANTOM5:124.1 Scaled Tags Per Million
Pig:45.8 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 70.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 61.5
2565 Male, age 75, midline 88.3
1981 Female, age 72, midline 60.1
2194 Female, age 79, both hemispheres 58.2
2816 Male, age 47, midline 56.8
2048 Male, age 55, midline 44.3
Cervical spinal cord, dorsal horn
nTPM: 70.0
2297 Male, age 75, both hemispheres 76.8
2069 Male, age 47, both hemispheres 74.7
1877 Male, age 55, unknown 71.5
2721 Male, age 90, both hemispheres 68.7
2296 Male, age 66, both hemispheres 64.2
2173 Female, age 72, unknown 63.9
Cervical spinal cord, ventral horn
nTPM: 70.2
2480 Male, age 75, both hemispheres 102.8
2809 Male, age 90, both hemispheres 72.3
2295 Male, age 66, both hemispheres 71.9
2098 Female, age 72, unknown 63.9
2068 Male, age 55, unknown 57.0
2820 Female, age 79, both hemispheres 53.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 112.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 112.3
Samples: 159

Max nTPM: 157.4
Min nTPM: 67.4
Std nTPM: 16.8
Median nTPM: 112.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 157.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 153.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 152.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 151.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 148.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 145.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 142.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 142.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 140.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 139.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 137.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 137.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 137.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 134.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 134.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 133.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 133.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 131.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 131.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 130.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 130.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 130.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 129.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 129.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 128.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 128.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 128.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 127.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 126.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 126.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 125.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 125.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 124.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 124.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 124.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 123.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 123.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 123.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 122.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 122.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 122.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 121.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 121.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 121.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 121.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 121.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 120.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 120.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 120.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 120.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 120.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 120.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 119.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 119.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 118.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 118.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 118.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 118.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 117.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 117.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 117.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 117.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 116.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 116.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 115.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 115.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 115.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 115.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 115.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 114.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 114.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 114.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 113.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 113.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 113.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 113.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 113.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 113.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 112.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 112.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 112.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 112.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 112.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 111.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 111.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 111.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 111.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 110.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 110.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 110.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 110.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 110.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 110.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 110.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 109.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 109.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 109.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 108.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 108.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 108.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 108.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 108.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 107.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 105.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 104.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 104.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 104.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 103.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 103.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 103.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 102.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 102.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 102.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 102.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 102.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 102.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 101.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 101.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 100.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 99.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 99.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 98.9
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 98.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 98.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 98.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 98.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 96.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 96.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 95.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 95.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 95.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 95.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 95.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 95.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 95.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 94.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 94.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 93.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 93.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 93.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 92.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 92.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 92.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 92.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 91.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 91.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 90.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 89.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 88.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 88.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 87.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 81.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 81.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 81.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 78.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 76.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 75.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 72.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 67.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 124.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 124.1
FF:10159-103A6 76 years, female 145.8
FF:10181-103D1 60 years, female 102.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 45.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 45.8
Samples: 4

Max nTPM: 50.2
Min nTPM: 34.1
Sample A Female 49.1
Sample B Female 34.1
Sample C Male 50.2
Sample D Male 49.8
Ventral spinal cord
nTPM: 40.5
Samples: 4

Max nTPM: 46.1
Min nTPM: 35.8
Sample A Female 39.1
Sample B Female 35.8
Sample C Male 46.1
Sample D Male 41.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.