HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.4 nTPM
HPA:27.4 nTPM
GTEx:32.8 nTPM
FANTOM5:47.2 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:17.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076040
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.4
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
1911 Female, age 85, right hemisphere 26.1
2529 Female, age 94, left hemisphere 25.8
1855 Male, age 76, left hemisphere 25.7
2148 Female, age 91, left hemisphere 25.2
1898 Male, age 80, left hemisphere 25.1
2621 Female, age 67, right hemisphere 24.9
Dentate gyrus
nTPM: 26.3
2531 Female, age 67, both hemispheres 27.1
2010 Male, age 76, both hemispheres 27.0
2530 Female, age 94, left hemisphere 26.9
1927 Female, age 91, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.7
2528 Male, age 74, both hemispheres 25.1
Entorhinal gyrus
nTPM: 25.8
2764 Male, age 80, right hemisphere 27.9
1787 Male, age 76, left hemisphere 26.3
2117 Female, age 91, right hemisphere 26.3
1938 Female, age 85, left hemisphere 26.0
2686 Male, age 75, right hemisphere 24.8
2613 Female, age 94, left hemisphere 23.7
Hippocampus, CA1
nTPM: 26.2
2045 Male, age 76, both hemispheres 27.2
1873 Female, age 85, both hemispheres 26.4
2527 Male, age 74, both hemispheres 26.2
2749 Male, age 80, left hemisphere 26.0
2082 Female, age 91, right hemisphere 25.2
Hippocampus, CA2
nTPM: 26.3
1892 Male, age 76, both hemispheres 28.6
2249 Male, age 74, both hemispheres 27.5
1940 Female, age 85, left hemisphere 26.0
2437 Female, age 94, left hemisphere 25.6
1963 Male, age 80, left hemisphere 25.3
2113 Female, age 91, right hemisphere 24.9
Hippocampus, CA3
nTPM: 26.9
1867 Male, age 76, both hemispheres 29.9
2436 Male, age 74, both hemispheres 28.3
2620 Female, age 94, left hemisphere 27.2
1891 Female, age 85, both hemispheres 25.8
2861 Female, age 67, both hemispheres 25.3
2137 Male, age 80, left hemisphere 24.7
Parahippocampal cortex
nTPM: 26.9
2532 Female, age 72, left hemisphere 29.4
2018 Male, age 76, both hemispheres 27.4
1850 Male, age 80, both hemispheres 27.3
2693 Female, age 94, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.8
2622 Female, age 67, right hemisphere 26.8
2250 Female, age 67, right hemisphere 26.7
1933 Female, age 85, both hemispheres 26.4
2245 Female, age 91, both hemispheres 26.0
2692 Male, age 74, both hemispheres 25.5
Perirhinal gyrus
nTPM: 27.4
2848 Male, age 76, right hemisphere 28.3
1794 Male, age 80, right hemisphere 28.2
1841 Female, age 85, right hemisphere 27.4
2521 Female, age 94, right hemisphere 26.9
1847 Female, age 91, left hemisphere 26.2
Subiculum
nTPM: 26.7
1977 Female, age 85, both hemispheres 27.5
2619 Male, age 74, both hemispheres 27.5
2729 Female, age 91, right hemisphere 26.9
1901 Male, age 80, both hemispheres 26.5
2042 Male, age 76, both hemispheres 26.3
2438 Female, age 94, left hemisphere 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.8
Samples: 197

Max nTPM: 71.9
Min nTPM: 18.4
Std nTPM: 6.9
Median nTPM: 32.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 53.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 51.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 46.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 44.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 43.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.2
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 46.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 10.5
Min nTPM: 4.9
Sample A Female 10.5
Sample B Female 8.4
Sample C Male 6.3
Sample D Male 4.9
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 8.1
Min nTPM: 4.4
Sample A Female 7.1
Sample B Female 8.1
Sample C Male 4.9
Sample D Male 4.4
Subiculum
nTPM: 6.2
Samples: 4

Max nTPM: 8.2
Min nTPM: 4.2
Sample A Female 8.2
Sample B Female 7.7
Sample C Male 4.6
Sample D Male 4.2
Ventral hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.8
Sample A Female 7.8
Sample B Female 6.4
Sample C Male 6.8
Sample D Male 5.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.8
Sample A Male 13.8
Sample B Male 16.0
Sample C Female 15.2
Sample D Female 12.8
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.8
Sample A Male 15.8
Sample B Male 15.8
Sample C Female 20.0
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69116560 Antisense, RP_050317_02_H01, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.