HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.4 nTPM
HPA:68.4 nTPM
GTEx:135.1 nTPM
FANTOM5:378.6 Scaled Tags Per Million
Mouse:502.1 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB015336Antibody CAB069404
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.4
Sample id Sample description nTPM
Hippocampus
nTPM: 51.9
1898 Male, age 80, left hemisphere 64.3
2529 Female, age 94, left hemisphere 55.3
2621 Female, age 67, right hemisphere 52.5
1911 Female, age 85, right hemisphere 48.8
1855 Male, age 76, left hemisphere 48.2
2148 Female, age 91, left hemisphere 42.3
Dentate gyrus
nTPM: 52.1
2010 Male, age 76, both hemispheres 64.9
1927 Female, age 91, both hemispheres 55.7
2246 Female, age 85, both hemispheres 53.4
2528 Male, age 74, both hemispheres 49.0
2530 Female, age 94, left hemisphere 45.4
2531 Female, age 67, both hemispheres 44.5
Entorhinal gyrus
nTPM: 54.9
1938 Female, age 85, left hemisphere 65.5
2764 Male, age 80, right hemisphere 61.6
1787 Male, age 76, left hemisphere 60.7
2613 Female, age 94, left hemisphere 49.9
2117 Female, age 91, right hemisphere 48.6
2686 Male, age 75, right hemisphere 43.2
Hippocampus, CA1
nTPM: 56.5
2527 Male, age 74, both hemispheres 64.9
2749 Male, age 80, left hemisphere 58.6
2045 Male, age 76, both hemispheres 56.6
1873 Female, age 85, both hemispheres 53.2
2082 Female, age 91, right hemisphere 49.3
Hippocampus, CA2
nTPM: 56.1
2249 Male, age 74, both hemispheres 71.6
1892 Male, age 76, both hemispheres 65.8
2437 Female, age 94, left hemisphere 51.3
1940 Female, age 85, left hemisphere 49.7
1963 Male, age 80, left hemisphere 49.4
2113 Female, age 91, right hemisphere 48.8
Hippocampus, CA3
nTPM: 55.4
2436 Male, age 74, both hemispheres 72.1
1867 Male, age 76, both hemispheres 61.8
1891 Female, age 85, both hemispheres 58.1
2137 Male, age 80, left hemisphere 52.7
2861 Female, age 67, both hemispheres 45.6
2620 Female, age 94, left hemisphere 41.8
Parahippocampal cortex
nTPM: 58.6
2250 Female, age 67, right hemisphere 72.1
2018 Male, age 76, both hemispheres 66.5
1933 Female, age 85, both hemispheres 66.2
1850 Male, age 80, both hemispheres 64.5
1990 Female, age 91, right hemisphere 63.2
2532 Female, age 72, left hemisphere 56.8
2245 Female, age 91, both hemispheres 56.3
2693 Female, age 94, both hemispheres 48.9
2622 Female, age 67, right hemisphere 46.4
2692 Male, age 74, both hemispheres 44.9
Perirhinal gyrus
nTPM: 68.4
1847 Female, age 91, left hemisphere 82.5
2521 Female, age 94, right hemisphere 71.0
1841 Female, age 85, right hemisphere 70.1
1794 Male, age 80, right hemisphere 65.0
2848 Male, age 76, right hemisphere 53.3
Subiculum
nTPM: 55.1
1977 Female, age 85, both hemispheres 71.6
1901 Male, age 80, both hemispheres 58.0
2619 Male, age 74, both hemispheres 54.0
2438 Female, age 94, left hemisphere 52.2
2042 Male, age 76, both hemispheres 51.8
2729 Female, age 91, right hemisphere 42.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.1
Samples: 197

Max nTPM: 363.0
Min nTPM: 39.3
Std nTPM: 63.2
Median nTPM: 122.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 363.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 341.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 329.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 314.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 313.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 307.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 302.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 275.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 272.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 269.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 266.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 378.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 378.6
FF:10169-103B7 60 years, female 429.0
FF:10153-102I9 76 years, female 328.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 502.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 502.1
Samples: 4

Max nTPM: 588.0
Min nTPM: 414.7
Sample A Male 414.7
Sample B Male 514.3
Sample C Female 491.4
Sample D Female 588.0
Hippocampal formation
nTPM: 452.7
Samples: 4

Max nTPM: 496.5
Min nTPM: 406.3
Sample A Male 496.5
Sample B Male 406.3
Sample C Female 460.0
Sample D Female 448.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
69736076 Antisense, RP_050503_04_B06, Mouse strain C57BL/6J (56 days, male) 20.8
74736408 Antisense, RP_060306_01_D07, Mouse strain C57BL/6J (56 days, male) 5.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.