HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:250.1 nTPM
HPA:250.1 nTPM
GTEx:131.5 nTPM
FANTOM5:719.0 Scaled Tags Per Million
Pig:59.9 nTPM
Mouse:86.4 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071177Antibody CAB015196
Glial cells MediumMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 250.1
Sample id Sample description nTPM
Hippocampus
nTPM: 250.1
2148 Female, age 91, left hemisphere 269.9
2529 Female, age 94, left hemisphere 266.2
1855 Male, age 76, left hemisphere 259.3
1898 Male, age 80, left hemisphere 245.1
1911 Female, age 85, right hemisphere 243.3
2621 Female, age 67, right hemisphere 216.6
Dentate gyrus
nTPM: 241.6
2528 Male, age 74, both hemispheres 274.2
2010 Male, age 76, both hemispheres 254.6
2246 Female, age 85, both hemispheres 243.1
2530 Female, age 94, left hemisphere 236.3
1927 Female, age 91, both hemispheres 221.2
2531 Female, age 67, both hemispheres 220.3
Entorhinal gyrus
nTPM: 191.9
2117 Female, age 91, right hemisphere 249.7
2686 Male, age 75, right hemisphere 201.3
1787 Male, age 76, left hemisphere 198.4
1938 Female, age 85, left hemisphere 196.7
2764 Male, age 80, right hemisphere 161.8
2613 Female, age 94, left hemisphere 143.3
Hippocampus, CA1
nTPM: 229.0
1873 Female, age 85, both hemispheres 261.3
2527 Male, age 74, both hemispheres 259.2
2082 Female, age 91, right hemisphere 229.4
2045 Male, age 76, both hemispheres 215.0
2749 Male, age 80, left hemisphere 180.0
Hippocampus, CA2
nTPM: 218.4
2249 Male, age 74, both hemispheres 249.5
2113 Female, age 91, right hemisphere 248.3
1940 Female, age 85, left hemisphere 234.8
2437 Female, age 94, left hemisphere 214.3
1963 Male, age 80, left hemisphere 187.8
1892 Male, age 76, both hemispheres 176.0
Hippocampus, CA3
nTPM: 215.9
1891 Female, age 85, both hemispheres 244.5
2620 Female, age 94, left hemisphere 232.7
2861 Female, age 67, both hemispheres 230.5
2436 Male, age 74, both hemispheres 205.2
2137 Male, age 80, left hemisphere 192.1
1867 Male, age 76, both hemispheres 190.4
Parahippocampal cortex
nTPM: 194.0
2250 Female, age 67, right hemisphere 223.8
2692 Male, age 74, both hemispheres 222.5
2018 Male, age 76, both hemispheres 197.0
2245 Female, age 91, both hemispheres 196.5
2622 Female, age 67, right hemisphere 193.2
1933 Female, age 85, both hemispheres 193.0
1850 Male, age 80, both hemispheres 190.5
1990 Female, age 91, right hemisphere 188.7
2693 Female, age 94, both hemispheres 175.9
2532 Female, age 72, left hemisphere 159.4
Perirhinal gyrus
nTPM: 184.6
1841 Female, age 85, right hemisphere 195.0
1794 Male, age 80, right hemisphere 191.9
2521 Female, age 94, right hemisphere 188.5
1847 Female, age 91, left hemisphere 185.0
2848 Male, age 76, right hemisphere 162.5
Subiculum
nTPM: 221.8
2729 Female, age 91, right hemisphere 291.1
2619 Male, age 74, both hemispheres 236.5
2042 Male, age 76, both hemispheres 228.9
1901 Male, age 80, both hemispheres 195.4
1977 Female, age 85, both hemispheres 194.3
2438 Female, age 94, left hemisphere 184.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.5
Samples: 197

Max nTPM: 458.0
Min nTPM: 43.7
Std nTPM: 66.0
Median nTPM: 116.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 458.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 428.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 381.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 349.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 337.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 318.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 313.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 306.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 295.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 279.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 277.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 719.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 719.0
FF:10153-102I9 76 years, female 775.6
FF:10169-103B7 60 years, female 662.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 61.1
Min nTPM: 55.0
Sample A Female 55.0
Sample B Female 58.3
Sample C Male 57.5
Sample D Male 61.1
Entorhinal cortex
nTPM: 60.0
Samples: 4

Max nTPM: 63.6
Min nTPM: 57.3
Sample A Female 57.3
Sample B Female 59.0
Sample C Male 63.6
Sample D Male 60.0
Subiculum
nTPM: 55.1
Samples: 4

Max nTPM: 58.7
Min nTPM: 51.6
Sample A Female 56.1
Sample B Female 58.7
Sample C Male 51.6
Sample D Male 54.0
Ventral hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 60.0
Min nTPM: 46.8
Sample A Female 46.8
Sample B Female 60.0
Sample C Male 53.0
Sample D Male 57.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.0
Samples: 4

Max nTPM: 92.4
Min nTPM: 75.8
Sample A Male 84.2
Sample B Male 92.4
Sample C Female 79.4
Sample D Female 75.8
Hippocampal formation
nTPM: 86.4
Samples: 4

Max nTPM: 90.9
Min nTPM: 81.0
Sample A Male 86.5
Sample B Male 90.9
Sample C Female 87.2
Sample D Female 81.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
77413704 Antisense, RP_070205_01_E07, Mouse strain C57BL/6J (56 days, male) 5.7
70919167 Antisense, RP_050712_04_C11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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