HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.4 nTPM
HPA:71.4 nTPM
GTEx:60.9 nTPM
FANTOM5:42.5 Scaled Tags Per Million
Pig:65.7 nTPM
Mouse:29.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040596Antibody HPA040617
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.4
Sample id Sample description nTPM
Hippocampus
nTPM: 54.8
1898 Male, age 80, left hemisphere 58.8
2621 Female, age 67, right hemisphere 58.4
1855 Male, age 76, left hemisphere 55.5
2529 Female, age 94, left hemisphere 53.7
2148 Female, age 91, left hemisphere 52.1
1911 Female, age 85, right hemisphere 50.3
Dentate gyrus
nTPM: 56.9
2246 Female, age 85, both hemispheres 58.5
2528 Male, age 74, both hemispheres 58.5
2530 Female, age 94, left hemisphere 58.4
2531 Female, age 67, both hemispheres 57.9
2010 Male, age 76, both hemispheres 55.1
1927 Female, age 91, both hemispheres 53.1
Entorhinal gyrus
nTPM: 61.6
2764 Male, age 80, right hemisphere 66.2
2613 Female, age 94, left hemisphere 63.6
1787 Male, age 76, left hemisphere 62.4
1938 Female, age 85, left hemisphere 62.4
2686 Male, age 75, right hemisphere 60.2
2117 Female, age 91, right hemisphere 54.8
Hippocampus, CA1
nTPM: 55.2
2082 Female, age 91, right hemisphere 59.8
2527 Male, age 74, both hemispheres 56.8
2749 Male, age 80, left hemisphere 56.1
1873 Female, age 85, both hemispheres 53.0
2045 Male, age 76, both hemispheres 50.2
Hippocampus, CA2
nTPM: 57.6
2249 Male, age 74, both hemispheres 63.9
2437 Female, age 94, left hemisphere 57.6
1940 Female, age 85, left hemisphere 56.7
2113 Female, age 91, right hemisphere 56.5
1892 Male, age 76, both hemispheres 56.1
1963 Male, age 80, left hemisphere 54.8
Hippocampus, CA3
nTPM: 61.5
2436 Male, age 74, both hemispheres 95.8
1891 Female, age 85, both hemispheres 56.2
2861 Female, age 67, both hemispheres 56.2
2620 Female, age 94, left hemisphere 54.7
1867 Male, age 76, both hemispheres 53.4
2137 Male, age 80, left hemisphere 53.1
Parahippocampal cortex
nTPM: 63.3
1850 Male, age 80, both hemispheres 70.0
1933 Female, age 85, both hemispheres 67.7
2693 Female, age 94, both hemispheres 65.4
2245 Female, age 91, both hemispheres 63.7
2250 Female, age 67, right hemisphere 63.3
1990 Female, age 91, right hemisphere 62.9
2532 Female, age 72, left hemisphere 61.8
2622 Female, age 67, right hemisphere 61.8
2692 Male, age 74, both hemispheres 61.8
2018 Male, age 76, both hemispheres 55.1
Perirhinal gyrus
nTPM: 71.4
1847 Female, age 91, left hemisphere 77.3
1794 Male, age 80, right hemisphere 74.9
1841 Female, age 85, right hemisphere 71.9
2521 Female, age 94, right hemisphere 70.8
2848 Male, age 76, right hemisphere 62.2
Subiculum
nTPM: 58.4
1977 Female, age 85, both hemispheres 64.6
2438 Female, age 94, left hemisphere 63.0
2619 Male, age 74, both hemispheres 62.0
1901 Male, age 80, both hemispheres 56.0
2042 Male, age 76, both hemispheres 52.7
2729 Female, age 91, right hemisphere 52.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.9
Samples: 197

Max nTPM: 128.6
Min nTPM: 27.7
Std nTPM: 13.5
Median nTPM: 58.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 128.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 103.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 102.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 98.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 93.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 93.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 93.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 89.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 87.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 86.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.5
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 40.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 85.8
Min nTPM: 48.9
Sample A Female 85.8
Sample B Female 72.0
Sample C Male 55.8
Sample D Male 48.9
Entorhinal cortex
nTPM: 48.5
Samples: 4

Max nTPM: 54.4
Min nTPM: 41.5
Sample A Female 54.4
Sample B Female 46.2
Sample C Male 51.9
Sample D Male 41.5
Subiculum
nTPM: 58.2
Samples: 4

Max nTPM: 76.8
Min nTPM: 48.4
Sample A Female 76.8
Sample B Female 51.6
Sample C Male 55.9
Sample D Male 48.4
Ventral hippocampus
nTPM: 62.7
Samples: 4

Max nTPM: 73.1
Min nTPM: 44.5
Sample A Female 64.2
Sample B Female 44.5
Sample C Male 69.0
Sample D Male 73.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 34.8
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 27.8
Sample C Female 28.7
Sample D Female 34.8
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 29.3
Min nTPM: 25.0
Sample A Male 29.3
Sample B Male 26.7
Sample C Female 27.9
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71147834 Antisense, RP_050719_02_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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