HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:33.2 nTPM
FANTOM5:225.0 Scaled Tags Per Million
Pig:70.4 nTPM
Mouse:40.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015522Antibody HPA020876
Glial cells MediumNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
2621 Female, age 67, right hemisphere 26.4
1898 Male, age 80, left hemisphere 25.3
1855 Male, age 76, left hemisphere 20.3
2529 Female, age 94, left hemisphere 17.1
2148 Female, age 91, left hemisphere 16.6
1911 Female, age 85, right hemisphere 11.4
Dentate gyrus
nTPM: 19.8
2530 Female, age 94, left hemisphere 24.1
1927 Female, age 91, both hemispheres 23.1
2010 Male, age 76, both hemispheres 22.1
2531 Female, age 67, both hemispheres 19.1
2246 Female, age 85, both hemispheres 18.5
2528 Male, age 74, both hemispheres 11.7
Entorhinal gyrus
nTPM: 28.3
2764 Male, age 80, right hemisphere 33.2
2613 Female, age 94, left hemisphere 32.1
2686 Male, age 75, right hemisphere 31.3
1938 Female, age 85, left hemisphere 29.6
1787 Male, age 76, left hemisphere 23.5
2117 Female, age 91, right hemisphere 19.7
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 35.9
1873 Female, age 85, both hemispheres 25.1
2045 Male, age 76, both hemispheres 21.2
2527 Male, age 74, both hemispheres 18.3
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 18.0
1892 Male, age 76, both hemispheres 32.8
1963 Male, age 80, left hemisphere 26.5
2437 Female, age 94, left hemisphere 15.5
1940 Female, age 85, left hemisphere 12.5
2249 Male, age 74, both hemispheres 11.0
2113 Female, age 91, right hemisphere 9.9
Hippocampus, CA3
nTPM: 17.3
1867 Male, age 76, both hemispheres 22.9
2620 Female, age 94, left hemisphere 22.0
1891 Female, age 85, both hemispheres 21.8
2137 Male, age 80, left hemisphere 19.8
2861 Female, age 67, both hemispheres 13.8
2436 Male, age 74, both hemispheres 3.7
Parahippocampal cortex
nTPM: 26.1
1850 Male, age 80, both hemispheres 36.3
1990 Female, age 91, right hemisphere 30.9
2532 Female, age 72, left hemisphere 30.5
2245 Female, age 91, both hemispheres 28.9
1933 Female, age 85, both hemispheres 28.2
2622 Female, age 67, right hemisphere 25.6
2693 Female, age 94, both hemispheres 24.9
2018 Male, age 76, both hemispheres 20.0
2692 Male, age 74, both hemispheres 19.0
2250 Female, age 67, right hemisphere 16.6
Perirhinal gyrus
nTPM: 31.0
1847 Female, age 91, left hemisphere 34.7
1794 Male, age 80, right hemisphere 33.8
1841 Female, age 85, right hemisphere 31.8
2848 Male, age 76, right hemisphere 29.8
2521 Female, age 94, right hemisphere 24.8
Subiculum
nTPM: 20.8
1977 Female, age 85, both hemispheres 28.3
2438 Female, age 94, left hemisphere 25.9
1901 Male, age 80, both hemispheres 25.4
2619 Male, age 74, both hemispheres 20.3
2042 Male, age 76, both hemispheres 17.8
2729 Female, age 91, right hemisphere 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 64.4
Min nTPM: 12.3
Std nTPM: 9.7
Median nTPM: 31.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 64.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 61.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 58.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 55.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 55.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 54.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 54.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 53.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 225.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 225.0
FF:10153-102I9 76 years, female 233.4
FF:10169-103B7 60 years, female 216.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 78.2
Min nTPM: 52.7
Sample A Female 78.2
Sample B Female 64.6
Sample C Male 69.0
Sample D Male 52.7
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 73.8
Min nTPM: 66.6
Sample A Female 73.8
Sample B Female 71.3
Sample C Male 70.1
Sample D Male 66.6
Subiculum
nTPM: 66.6
Samples: 4

Max nTPM: 83.6
Min nTPM: 59.8
Sample A Female 83.6
Sample B Female 61.3
Sample C Male 59.8
Sample D Male 61.8
Ventral hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 71.0
Min nTPM: 51.7
Sample A Female 71.0
Sample B Female 51.7
Sample C Male 59.9
Sample D Male 60.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 43.1
Min nTPM: 35.5
Sample A Male 40.7
Sample B Male 43.1
Sample C Female 35.5
Sample D Female 40.7
Hippocampal formation
nTPM: 29.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 26.6
Sample A Male 29.1
Sample B Male 30.5
Sample C Female 29.8
Sample D Female 26.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
634451 Antisense, RP_040914_01_A01, Mouse strain C57BL/6J (56 days, male) 4.4

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