HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:109.1 nTPM
HPA:109.1 nTPM
GTEx:88.8 nTPM
FANTOM5:103.1 Scaled Tags Per Million
Pig:50.1 nTPM
Mouse:132.5 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008425
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.1
Sample id Sample description nTPM
Hippocampus
nTPM: 101.3
1898 Male, age 80, left hemisphere 112.0
2621 Female, age 67, right hemisphere 101.7
2529 Female, age 94, left hemisphere 100.6
1855 Male, age 76, left hemisphere 100.0
1911 Female, age 85, right hemisphere 97.5
2148 Female, age 91, left hemisphere 96.2
Dentate gyrus
nTPM: 102.5
1927 Female, age 91, both hemispheres 107.6
2530 Female, age 94, left hemisphere 105.5
2010 Male, age 76, both hemispheres 104.2
2246 Female, age 85, both hemispheres 101.1
2528 Male, age 74, both hemispheres 98.8
2531 Female, age 67, both hemispheres 97.8
Entorhinal gyrus
nTPM: 102.2
1938 Female, age 85, left hemisphere 109.3
2764 Male, age 80, right hemisphere 108.2
1787 Male, age 76, left hemisphere 103.5
2117 Female, age 91, right hemisphere 102.3
2613 Female, age 94, left hemisphere 96.4
2686 Male, age 75, right hemisphere 93.3
Hippocampus, CA1
nTPM: 105.0
2749 Male, age 80, left hemisphere 114.2
1873 Female, age 85, both hemispheres 107.0
2045 Male, age 76, both hemispheres 104.7
2527 Male, age 74, both hemispheres 101.7
2082 Female, age 91, right hemisphere 97.7
Hippocampus, CA2
nTPM: 104.2
1892 Male, age 76, both hemispheres 111.9
2249 Male, age 74, both hemispheres 106.3
1963 Male, age 80, left hemisphere 106.1
2437 Female, age 94, left hemisphere 101.4
1940 Female, age 85, left hemisphere 101.3
2113 Female, age 91, right hemisphere 98.0
Hippocampus, CA3
nTPM: 102.7
2436 Male, age 74, both hemispheres 107.0
1867 Male, age 76, both hemispheres 106.9
2137 Male, age 80, left hemisphere 106.5
1891 Female, age 85, both hemispheres 102.8
2620 Female, age 94, left hemisphere 99.1
2861 Female, age 67, both hemispheres 94.2
Parahippocampal cortex
nTPM: 100.9
1850 Male, age 80, both hemispheres 111.5
1990 Female, age 91, right hemisphere 107.0
1933 Female, age 85, both hemispheres 105.8
2250 Female, age 67, right hemisphere 102.9
2018 Male, age 76, both hemispheres 101.2
2532 Female, age 72, left hemisphere 100.7
2245 Female, age 91, both hemispheres 100.0
2692 Male, age 74, both hemispheres 95.5
2693 Female, age 94, both hemispheres 93.7
2622 Female, age 67, right hemisphere 90.6
Perirhinal gyrus
nTPM: 109.1
1847 Female, age 91, left hemisphere 116.9
1794 Male, age 80, right hemisphere 113.6
1841 Female, age 85, right hemisphere 110.4
2848 Male, age 76, right hemisphere 102.9
2521 Female, age 94, right hemisphere 101.6
Subiculum
nTPM: 100.4
1977 Female, age 85, both hemispheres 107.8
1901 Male, age 80, both hemispheres 104.6
2042 Male, age 76, both hemispheres 99.8
2619 Male, age 74, both hemispheres 98.9
2438 Female, age 94, left hemisphere 96.8
2729 Female, age 91, right hemisphere 94.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.8
Samples: 197

Max nTPM: 150.5
Min nTPM: 60.5
Std nTPM: 15.5
Median nTPM: 85.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 150.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 133.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 130.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 129.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 129.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 127.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 125.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 122.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 121.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 119.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 117.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.1
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 75.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 63.7
Min nTPM: 36.5
Sample A Female 63.7
Sample B Female 52.0
Sample C Male 48.3
Sample D Male 36.5
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 51.2
Min nTPM: 36.1
Sample A Female 45.6
Sample B Female 51.2
Sample C Male 45.4
Sample D Male 36.1
Subiculum
nTPM: 47.5
Samples: 4

Max nTPM: 59.1
Min nTPM: 41.2
Sample A Female 59.1
Sample B Female 45.7
Sample C Male 44.1
Sample D Male 41.2
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 58.2
Min nTPM: 34.6
Sample A Female 47.7
Sample B Female 34.6
Sample C Male 58.2
Sample D Male 51.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.0
Samples: 4

Max nTPM: 134.5
Min nTPM: 119.1
Sample A Male 123.6
Sample B Male 122.9
Sample C Female 134.5
Sample D Female 119.1
Hippocampal formation
nTPM: 132.5
Samples: 4

Max nTPM: 143.7
Min nTPM: 122.8
Sample A Male 143.7
Sample B Male 122.8
Sample C Female 137.9
Sample D Female 125.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
81600108 Antisense, RP_080205_02_D01, Mouse strain C57BL/6J (56 days, male) 18.6
413791 Antisense, RP_040809_01_E01, Mouse strain C57BL/6J (56 days, male) 18.4

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The Human Protein Atlas

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