HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:676.6 nTPM
HPA:676.6 nTPM
GTEx:440.8 nTPM
FANTOM5:692.5 Scaled Tags Per Million
Pig:685.0 nTPM
Mouse:1351.1 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007316Antibody HPA007571Antibody CAB008636
Glial cells HighMediumHigh
Neuronal cells Not detectedMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 676.6
Sample id Sample description nTPM
Hippocampus
nTPM: 646.8
2529 Female, age 94, left hemisphere 680.0
2621 Female, age 67, right hemisphere 651.6
1911 Female, age 85, right hemisphere 648.8
1855 Male, age 76, left hemisphere 644.7
1898 Male, age 80, left hemisphere 637.1
2148 Female, age 91, left hemisphere 618.8
Dentate gyrus
nTPM: 628.3
2010 Male, age 76, both hemispheres 663.3
2246 Female, age 85, both hemispheres 657.6
2528 Male, age 74, both hemispheres 619.8
1927 Female, age 91, both hemispheres 618.5
2530 Female, age 94, left hemisphere 614.7
2531 Female, age 67, both hemispheres 595.6
Entorhinal gyrus
nTPM: 667.1
2117 Female, age 91, right hemisphere 729.2
1938 Female, age 85, left hemisphere 716.5
2686 Male, age 75, right hemisphere 692.7
1787 Male, age 76, left hemisphere 635.9
2764 Male, age 80, right hemisphere 634.7
2613 Female, age 94, left hemisphere 593.3
Hippocampus, CA1
nTPM: 627.1
2527 Male, age 74, both hemispheres 671.3
1873 Female, age 85, both hemispheres 625.1
2082 Female, age 91, right hemisphere 620.5
2749 Male, age 80, left hemisphere 613.7
2045 Male, age 76, both hemispheres 604.6
Hippocampus, CA2
nTPM: 632.7
1940 Female, age 85, left hemisphere 650.0
2249 Male, age 74, both hemispheres 642.8
2113 Female, age 91, right hemisphere 642.1
2437 Female, age 94, left hemisphere 639.0
1963 Male, age 80, left hemisphere 623.8
1892 Male, age 76, both hemispheres 598.5
Hippocampus, CA3
nTPM: 624.5
1891 Female, age 85, both hemispheres 661.0
2436 Male, age 74, both hemispheres 648.7
1867 Male, age 76, both hemispheres 642.0
2861 Female, age 67, both hemispheres 616.2
2137 Male, age 80, left hemisphere 606.4
2620 Female, age 94, left hemisphere 572.4
Parahippocampal cortex
nTPM: 676.6
1933 Female, age 85, both hemispheres 751.4
2692 Male, age 74, both hemispheres 738.0
2622 Female, age 67, right hemisphere 688.6
2693 Female, age 94, both hemispheres 682.6
2250 Female, age 67, right hemisphere 674.6
2532 Female, age 72, left hemisphere 666.6
1990 Female, age 91, right hemisphere 649.3
2245 Female, age 91, both hemispheres 645.2
1850 Male, age 80, both hemispheres 638.0
2018 Male, age 76, both hemispheres 631.7
Perirhinal gyrus
nTPM: 658.9
1841 Female, age 85, right hemisphere 711.9
1794 Male, age 80, right hemisphere 658.4
2521 Female, age 94, right hemisphere 649.4
1847 Female, age 91, left hemisphere 647.2
2848 Male, age 76, right hemisphere 627.3
Subiculum
nTPM: 666.6
2042 Male, age 76, both hemispheres 686.9
2619 Male, age 74, both hemispheres 686.1
1977 Female, age 85, both hemispheres 662.2
2729 Female, age 91, right hemisphere 661.8
2438 Female, age 94, left hemisphere 651.3
1901 Male, age 80, both hemispheres 651.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 440.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 440.8
Samples: 197

Max nTPM: 1339.1
Min nTPM: 119.3
Std nTPM: 201.0
Median nTPM: 393.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1339.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1135.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1068.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1042.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 995.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 987.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 965.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 936.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 926.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 875.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 867.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 692.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 692.5
FF:10153-102I9 76 years, female 1007.3
FF:10169-103B7 60 years, female 377.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 685.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 569.5
Samples: 4

Max nTPM: 802.8
Min nTPM: 369.9
Sample A Female 802.8
Sample B Female 431.9
Sample C Male 673.5
Sample D Male 369.9
Entorhinal cortex
nTPM: 685.0
Samples: 4

Max nTPM: 954.8
Min nTPM: 563.9
Sample A Female 574.8
Sample B Female 954.8
Sample C Male 646.3
Sample D Male 563.9
Subiculum
nTPM: 443.0
Samples: 4

Max nTPM: 524.2
Min nTPM: 368.0
Sample A Female 524.2
Sample B Female 410.3
Sample C Male 368.0
Sample D Male 469.5
Ventral hippocampus
nTPM: 445.2
Samples: 4

Max nTPM: 562.8
Min nTPM: 298.7
Sample A Female 405.7
Sample B Female 298.7
Sample C Male 513.5
Sample D Male 562.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1351.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1351.1
Samples: 4

Max nTPM: 1504.8
Min nTPM: 1224.3
Sample A Male 1358.8
Sample B Male 1224.3
Sample C Female 1504.8
Sample D Female 1316.6
Hippocampal formation
nTPM: 1230.9
Samples: 4

Max nTPM: 1297.1
Min nTPM: 1079.4
Sample A Male 1281.6
Sample B Male 1079.4
Sample C Female 1265.3
Sample D Female 1297.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 18.8
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 14.1
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 10.3
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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