HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:115.9 nTPM
HPA:115.9 nTPM
GTEx:92.2 nTPM
FANTOM5:133.7 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:215.7 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.9
Sample id Sample description nTPM
Hippocampus
nTPM: 109.1
2529 Female, age 94, left hemisphere 120.1
1911 Female, age 85, right hemisphere 112.7
1898 Male, age 80, left hemisphere 109.5
2148 Female, age 91, left hemisphere 106.0
1855 Male, age 76, left hemisphere 104.2
2621 Female, age 67, right hemisphere 101.9
Dentate gyrus
nTPM: 99.9
2528 Male, age 74, both hemispheres 124.8
2246 Female, age 85, both hemispheres 108.0
1927 Female, age 91, both hemispheres 96.6
2010 Male, age 76, both hemispheres 93.1
2530 Female, age 94, left hemisphere 92.5
2531 Female, age 67, both hemispheres 84.6
Entorhinal gyrus
nTPM: 102.6
2117 Female, age 91, right hemisphere 115.5
1938 Female, age 85, left hemisphere 111.6
1787 Male, age 76, left hemisphere 98.7
2764 Male, age 80, right hemisphere 97.8
2613 Female, age 94, left hemisphere 96.9
2686 Male, age 75, right hemisphere 94.9
Hippocampus, CA1
nTPM: 108.5
2527 Male, age 74, both hemispheres 131.9
2082 Female, age 91, right hemisphere 108.1
1873 Female, age 85, both hemispheres 106.8
2749 Male, age 80, left hemisphere 102.1
2045 Male, age 76, both hemispheres 93.7
Hippocampus, CA2
nTPM: 103.8
2249 Male, age 74, both hemispheres 130.6
2113 Female, age 91, right hemisphere 112.2
1940 Female, age 85, left hemisphere 99.2
2437 Female, age 94, left hemisphere 97.3
1892 Male, age 76, both hemispheres 92.4
1963 Male, age 80, left hemisphere 91.0
Hippocampus, CA3
nTPM: 106.1
2436 Male, age 74, both hemispheres 117.0
2137 Male, age 80, left hemisphere 116.3
1891 Female, age 85, both hemispheres 109.4
1867 Male, age 76, both hemispheres 108.7
2620 Female, age 94, left hemisphere 97.1
2861 Female, age 67, both hemispheres 88.1
Parahippocampal cortex
nTPM: 110.5
2250 Female, age 67, right hemisphere 130.8
1933 Female, age 85, both hemispheres 119.2
2692 Male, age 74, both hemispheres 113.6
1850 Male, age 80, both hemispheres 111.4
2693 Female, age 94, both hemispheres 110.0
2622 Female, age 67, right hemisphere 108.7
2018 Male, age 76, both hemispheres 107.3
2245 Female, age 91, both hemispheres 105.3
1990 Female, age 91, right hemisphere 101.6
2532 Female, age 72, left hemisphere 97.3
Perirhinal gyrus
nTPM: 115.9
1794 Male, age 80, right hemisphere 127.0
1841 Female, age 85, right hemisphere 126.0
1847 Female, age 91, left hemisphere 113.7
2521 Female, age 94, right hemisphere 111.9
2848 Male, age 76, right hemisphere 101.2
Subiculum
nTPM: 110.6
2729 Female, age 91, right hemisphere 123.5
2619 Male, age 74, both hemispheres 121.3
1901 Male, age 80, both hemispheres 110.4
2042 Male, age 76, both hemispheres 104.0
1977 Female, age 85, both hemispheres 103.3
2438 Female, age 94, left hemisphere 101.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.2
Samples: 197

Max nTPM: 215.0
Min nTPM: 18.6
Std nTPM: 38.4
Median nTPM: 86.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 215.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 205.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 198.1
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 185.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 184.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 182.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 176.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 173.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 171.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 170.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 169.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.7
FF:10153-102I9 76 years, female 169.1
FF:10169-103B7 60 years, female 98.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 49.2
Min nTPM: 29.1
Sample A Female 49.2
Sample B Female 38.1
Sample C Male 46.5
Sample D Male 29.1
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 62.2
Min nTPM: 47.2
Sample A Female 56.3
Sample B Female 50.7
Sample C Male 62.2
Sample D Male 47.2
Subiculum
nTPM: 42.1
Samples: 4

Max nTPM: 57.0
Min nTPM: 31.2
Sample A Female 57.0
Sample B Female 40.0
Sample C Male 40.3
Sample D Male 31.2
Ventral hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 55.4
Min nTPM: 33.4
Sample A Female 41.5
Sample B Female 33.4
Sample C Male 55.4
Sample D Male 47.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 215.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 215.7
Samples: 4

Max nTPM: 232.1
Min nTPM: 175.0
Sample A Male 224.2
Sample B Male 175.0
Sample C Female 232.1
Sample D Female 231.6
Hippocampal formation
nTPM: 200.4
Samples: 4

Max nTPM: 234.2
Min nTPM: 174.4
Sample A Male 234.2
Sample B Male 184.5
Sample C Female 174.4
Sample D Female 208.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
70429429 Antisense, RP_050614_01_F06, Mouse strain C57BL/6J (56 days, male) 7.8
74047768 Antisense, RP_051214_01_H06, Mouse strain C57BL/6J (56 days, male) 5.7

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