HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:266.6 nTPM
HPA:266.6 nTPM
GTEx:206.8 nTPM
FANTOM5:286.4 Scaled Tags Per Million
Pig:70.8 nTPM
Mouse:60.8 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036268
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 266.6
Sample id Sample description nTPM
Hippocampus
nTPM: 247.7
2529 Female, age 94, left hemisphere 262.1
1898 Male, age 80, left hemisphere 249.4
1911 Female, age 85, right hemisphere 249.1
2621 Female, age 67, right hemisphere 243.9
2148 Female, age 91, left hemisphere 241.4
1855 Male, age 76, left hemisphere 240.6
Dentate gyrus
nTPM: 246.6
2530 Female, age 94, left hemisphere 264.8
2010 Male, age 76, both hemispheres 251.1
2528 Male, age 74, both hemispheres 247.2
2246 Female, age 85, both hemispheres 246.7
2531 Female, age 67, both hemispheres 239.8
1927 Female, age 91, both hemispheres 230.0
Entorhinal gyrus
nTPM: 266.6
2764 Male, age 80, right hemisphere 280.8
1938 Female, age 85, left hemisphere 276.7
2117 Female, age 91, right hemisphere 264.3
1787 Male, age 76, left hemisphere 262.0
2686 Male, age 75, right hemisphere 259.1
2613 Female, age 94, left hemisphere 256.5
Hippocampus, CA1
nTPM: 245.3
2082 Female, age 91, right hemisphere 252.4
2749 Male, age 80, left hemisphere 249.5
2527 Male, age 74, both hemispheres 247.5
1873 Female, age 85, both hemispheres 242.0
2045 Male, age 76, both hemispheres 235.0
Hippocampus, CA2
nTPM: 247.8
1940 Female, age 85, left hemisphere 259.7
2249 Male, age 74, both hemispheres 249.3
2437 Female, age 94, left hemisphere 248.4
1963 Male, age 80, left hemisphere 247.0
2113 Female, age 91, right hemisphere 246.4
1892 Male, age 76, both hemispheres 236.3
Hippocampus, CA3
nTPM: 245.5
1891 Female, age 85, both hemispheres 254.9
2620 Female, age 94, left hemisphere 254.9
2436 Male, age 74, both hemispheres 244.2
2861 Female, age 67, both hemispheres 240.2
1867 Male, age 76, both hemispheres 239.7
2137 Male, age 80, left hemisphere 239.1
Parahippocampal cortex
nTPM: 254.2
2692 Male, age 74, both hemispheres 271.3
1850 Male, age 80, both hemispheres 267.6
1933 Female, age 85, both hemispheres 262.9
2532 Female, age 72, left hemisphere 262.3
1990 Female, age 91, right hemisphere 257.1
2018 Male, age 76, both hemispheres 251.0
2622 Female, age 67, right hemisphere 248.6
2245 Female, age 91, both hemispheres 243.7
2693 Female, age 94, both hemispheres 239.5
2250 Female, age 67, right hemisphere 237.7
Perirhinal gyrus
nTPM: 255.7
1794 Male, age 80, right hemisphere 269.9
1847 Female, age 91, left hemisphere 258.0
1841 Female, age 85, right hemisphere 253.4
2848 Male, age 76, right hemisphere 250.0
2521 Female, age 94, right hemisphere 247.3
Subiculum
nTPM: 258.8
1977 Female, age 85, both hemispheres 268.2
2042 Male, age 76, both hemispheres 267.0
1901 Male, age 80, both hemispheres 266.1
2438 Female, age 94, left hemisphere 255.9
2619 Male, age 74, both hemispheres 254.1
2729 Female, age 91, right hemisphere 241.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 206.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 206.8
Samples: 197

Max nTPM: 481.9
Min nTPM: 85.9
Std nTPM: 65.3
Median nTPM: 190.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 481.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 457.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 452.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 424.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 384.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 377.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 355.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 348.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 344.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 337.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 331.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 286.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 286.4
FF:10153-102I9 76 years, female 289.3
FF:10169-103B7 60 years, female 283.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.9
Samples: 4

Max nTPM: 96.6
Min nTPM: 39.9
Sample A Female 96.6
Sample B Female 64.4
Sample C Male 82.5
Sample D Male 39.9
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 45.8
Min nTPM: 39.6
Sample A Female 39.6
Sample B Female 45.8
Sample C Male 42.8
Sample D Male 40.4
Subiculum
nTPM: 50.7
Samples: 4

Max nTPM: 61.5
Min nTPM: 40.7
Sample A Female 61.5
Sample B Female 52.1
Sample C Male 48.5
Sample D Male 40.7
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 73.5
Min nTPM: 40.5
Sample A Female 57.1
Sample B Female 40.5
Sample C Male 63.4
Sample D Male 73.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.8
Samples: 4

Max nTPM: 68.4
Min nTPM: 51.6
Sample A Male 68.4
Sample B Male 67.1
Sample C Female 56.1
Sample D Female 51.6
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 60.7
Min nTPM: 54.8
Sample A Male 54.8
Sample B Male 54.9
Sample C Female 60.0
Sample D Female 60.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
564753 Antisense, RP_040826_01_C09, Mouse strain C57BL/6J (56 days, male) 2.1

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