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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:207.0 nTPM
FANTOM5:312.0 Scaled Tags Per Million
Pig:187.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA038602Antibody HPA057592Antibody CAB006329
Glial cells HighLowMedium
Neuronal cells MediumMediumHigh







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 207.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 207.0
Samples: 246

Max nTPM: 475.3
Min nTPM: 102.9
Std nTPM: 54.0
Median nTPM: 193.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 475.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 370.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 367.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 339.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 332.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 331.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 320.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 318.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 316.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 312.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 308.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 307.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 307.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 304.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 302.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 301.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 300.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 298.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 297.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 296.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 289.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 288.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 288.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 287.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 282.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 278.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 276.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 276.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 274.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 273.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 272.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 270.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 270.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 270.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 267.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 265.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 264.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 264.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 263.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 261.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 261.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 257.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 257.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 255.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 253.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 252.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 250.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 250.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 248.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 247.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 245.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 245.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 245.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 243.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 242.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 240.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 239.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 238.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 238.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 238.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 237.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 237.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 236.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 236.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 236.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 235.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 235.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 234.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 234.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 232.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 229.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 227.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 226.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 226.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 226.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 226.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 225.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 225.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 224.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 221.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 221.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 220.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 220.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 220.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 220.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 218.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 217.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 217.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 216.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 216.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 215.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 215.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 215.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 214.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 213.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 213.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 212.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 212.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 211.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 209.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 209.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 208.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 208.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 207.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 206.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 205.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 205.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 205.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 205.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 204.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 203.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 203.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 201.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 201.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 199.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 198.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 197.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 197.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 196.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 195.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 193.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 193.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 193.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 192.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 192.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 192.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 192.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 191.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 191.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 191.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 190.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 190.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 189.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 189.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 189.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 188.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 186.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 185.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 185.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 185.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 184.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 184.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 184.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 183.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 183.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 183.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 183.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 182.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 182.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 182.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 181.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 181.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 181.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 180.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 180.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 180.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 179.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 179.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 178.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 178.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 178.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 178.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 176.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 176.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 176.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 175.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 175.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 174.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 174.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 173.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 171.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 171.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 171.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 171.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 170.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 170.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 170.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 170.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 170.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 169.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 169.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 169.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 168.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 168.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 168.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 167.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 167.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 167.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 167.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 167.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 166.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 166.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 166.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 165.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 165.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 163.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 162.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 161.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 160.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 160.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 160.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 159.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 158.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 155.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 155.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 154.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 154.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 154.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 154.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 153.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 151.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 151.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 150.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 149.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 149.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 148.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 148.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 146.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 144.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 143.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 138.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 138.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 137.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 134.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 134.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 133.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 132.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 131.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 128.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 127.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 127.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 124.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 122.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 119.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 102.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 312.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 312.0
FF:10164-103B2 76 years, female 312.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 187.5
Pig sample Sample description nTPM
Caudate
nTPM: 187.5
Samples: 4

Max nTPM: 255.2
Min nTPM: 140.7
Sample A Female 140.7
Sample B Female 199.7
Sample C Male 255.2
Sample D Male 154.3

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