HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:112.5 nTPM
HPA:112.5 nTPM
GTEx:77.6 nTPM
FANTOM5:100.5 Scaled Tags Per Million
Pig:87.4 nTPM
Mouse:99.2 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024517
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.5
Sample id Sample description nTPM
Hippocampus
nTPM: 81.7
2529 Female, age 94, left hemisphere 101.5
1898 Male, age 80, left hemisphere 83.9
2621 Female, age 67, right hemisphere 83.2
2148 Female, age 91, left hemisphere 77.1
1911 Female, age 85, right hemisphere 76.1
1855 Male, age 76, left hemisphere 68.7
Dentate gyrus
nTPM: 77.0
2528 Male, age 74, both hemispheres 88.5
2530 Female, age 94, left hemisphere 88.5
2246 Female, age 85, both hemispheres 81.9
2010 Male, age 76, both hemispheres 76.3
1927 Female, age 91, both hemispheres 64.9
2531 Female, age 67, both hemispheres 62.1
Entorhinal gyrus
nTPM: 99.5
1938 Female, age 85, left hemisphere 107.8
2764 Male, age 80, right hemisphere 106.6
1787 Male, age 76, left hemisphere 102.4
2686 Male, age 75, right hemisphere 97.6
2117 Female, age 91, right hemisphere 96.7
2613 Female, age 94, left hemisphere 86.0
Hippocampus, CA1
nTPM: 80.5
2527 Male, age 74, both hemispheres 93.9
2082 Female, age 91, right hemisphere 92.4
2749 Male, age 80, left hemisphere 88.4
1873 Female, age 85, both hemispheres 78.8
2045 Male, age 76, both hemispheres 49.1
Hippocampus, CA2
nTPM: 87.8
2113 Female, age 91, right hemisphere 93.7
2249 Male, age 74, both hemispheres 92.8
1892 Male, age 76, both hemispheres 88.2
2437 Female, age 94, left hemisphere 86.6
1963 Male, age 80, left hemisphere 83.3
1940 Female, age 85, left hemisphere 82.4
Hippocampus, CA3
nTPM: 74.5
1891 Female, age 85, both hemispheres 84.3
1867 Male, age 76, both hemispheres 82.2
2436 Male, age 74, both hemispheres 74.3
2861 Female, age 67, both hemispheres 73.0
2137 Male, age 80, left hemisphere 67.2
2620 Female, age 94, left hemisphere 66.3
Parahippocampal cortex
nTPM: 95.9
1850 Male, age 80, both hemispheres 109.1
1933 Female, age 85, both hemispheres 107.8
2692 Male, age 74, both hemispheres 99.6
1990 Female, age 91, right hemisphere 95.6
2250 Female, age 67, right hemisphere 95.6
2693 Female, age 94, both hemispheres 93.1
2622 Female, age 67, right hemisphere 91.3
2245 Female, age 91, both hemispheres 91.2
2532 Female, age 72, left hemisphere 88.8
2018 Male, age 76, both hemispheres 87.0
Perirhinal gyrus
nTPM: 112.5
1794 Male, age 80, right hemisphere 122.3
1841 Female, age 85, right hemisphere 120.2
1847 Female, age 91, left hemisphere 116.7
2848 Male, age 76, right hemisphere 105.6
2521 Female, age 94, right hemisphere 98.0
Subiculum
nTPM: 91.7
1977 Female, age 85, both hemispheres 110.2
2619 Male, age 74, both hemispheres 101.1
2438 Female, age 94, left hemisphere 92.1
2729 Female, age 91, right hemisphere 87.2
1901 Male, age 80, both hemispheres 82.3
2042 Male, age 76, both hemispheres 77.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.6
Samples: 197

Max nTPM: 150.1
Min nTPM: 21.9
Std nTPM: 21.8
Median nTPM: 76.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 150.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 143.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 139.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 135.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 134.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 127.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 122.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 121.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 119.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 118.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 115.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.5
FF:10153-102I9 76 years, female 123.6
FF:10169-103B7 60 years, female 77.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.4
Samples: 4

Max nTPM: 92.6
Min nTPM: 57.4
Sample A Female 92.6
Sample B Female 82.1
Sample C Male 69.4
Sample D Male 57.4
Entorhinal cortex
nTPM: 87.4
Samples: 4

Max nTPM: 93.9
Min nTPM: 79.2
Sample A Female 93.9
Sample B Female 91.6
Sample C Male 84.8
Sample D Male 79.2
Subiculum
nTPM: 72.8
Samples: 4

Max nTPM: 90.4
Min nTPM: 62.5
Sample A Female 90.4
Sample B Female 67.1
Sample C Male 71.0
Sample D Male 62.5
Ventral hippocampus
nTPM: 74.2
Samples: 4

Max nTPM: 89.3
Min nTPM: 51.0
Sample A Female 76.1
Sample B Female 51.0
Sample C Male 89.3
Sample D Male 80.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.2
Samples: 4

Max nTPM: 109.7
Min nTPM: 86.5
Sample A Male 98.5
Sample B Male 102.0
Sample C Female 86.5
Sample D Female 109.7
Hippocampal formation
nTPM: 82.2
Samples: 4

Max nTPM: 83.9
Min nTPM: 77.7
Sample A Male 77.7
Sample B Male 83.9
Sample C Female 83.6
Sample D Female 83.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
74357551 Antisense, RP_051214_01_B03, Mouse strain C57BL/6J (56 days, male) 9.3
68795416 Antisense, RP_041122_01_C04, Mouse strain C57BL/6J (56 days, male) 6.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.