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RAC1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:175.5 nTPM
FANTOM5:179.0 Scaled Tags Per Million
Pig:156.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047820Antibody CAB035994
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 175.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 175.5
Samples: 246

Max nTPM: 345.7
Min nTPM: 113.7
Std nTPM: 36.5
Median nTPM: 165.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 345.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 333.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 292.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 282.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 273.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 267.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 267.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 265.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 259.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 252.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 252.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 248.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 247.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 247.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 244.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 244.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 243.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 239.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 233.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 232.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 230.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 229.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 229.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 227.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 225.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 224.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 221.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 220.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 219.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 218.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 215.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 214.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 214.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 212.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 212.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 212.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 212.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 208.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 208.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 208.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 207.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 205.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 203.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 202.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 202.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 200.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 199.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 199.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 199.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 199.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 199.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 198.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 198.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 198.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 197.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 195.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 194.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 194.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 194.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 193.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 193.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 192.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 192.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 191.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 191.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 190.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 188.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 187.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 187.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 187.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 187.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 185.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 184.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 183.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 182.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 182.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 182.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 181.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 181.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 181.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 178.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 178.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 178.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 177.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 177.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 177.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 177.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 177.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 176.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 176.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 176.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 175.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 175.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 175.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 175.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 175.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 174.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 173.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 173.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 172.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 172.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 172.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 171.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 171.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 171.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 170.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 170.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 170.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 169.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 169.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 169.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 169.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 169.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 169.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 168.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 168.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 167.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 167.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 166.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 166.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 165.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 165.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 165.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 165.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 165.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 164.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 164.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 164.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 163.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 163.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 163.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 162.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 162.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 162.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 162.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 162.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 162.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 161.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 161.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 161.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 161.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 160.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 160.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 160.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 160.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 159.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 159.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 159.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 159.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 159.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 158.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 158.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 158.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 157.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 157.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 156.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 156.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 155.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 155.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 155.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 154.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 154.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 154.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 154.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 154.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 154.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 154.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 153.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 153.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 153.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 152.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 152.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 152.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 152.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 151.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 151.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 151.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 151.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 150.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 150.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 150.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 150.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 149.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 148.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 148.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 148.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 147.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 147.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 147.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 147.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 146.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 146.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 146.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 146.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 145.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 145.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 145.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 144.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 144.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 144.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 144.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 144.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 144.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 144.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 143.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 143.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 143.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 143.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 143.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 142.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 141.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 141.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 140.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 139.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 139.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 138.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 138.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 138.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 137.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 136.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 136.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 135.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 135.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 135.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 135.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 135.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 134.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 134.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 133.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 132.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 126.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 125.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 124.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 113.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 179.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 179.0
FF:10164-103B2 76 years, female 179.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 156.8
Pig sample Sample description nTPM
Caudate
nTPM: 156.8
Samples: 4

Max nTPM: 173.7
Min nTPM: 136.1
Sample A Female 156.9
Sample B Female 160.4
Sample C Male 173.7
Sample D Male 136.1

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