HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.3 nTPM
HPA:26.3 nTPM
GTEx:33.3 nTPM
FANTOM5:51.7 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:10.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020981Antibody HPA079208
Glial cells MediumMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
2621 Female, age 67, right hemisphere 22.7
1855 Male, age 76, left hemisphere 20.8
2529 Female, age 94, left hemisphere 17.9
1898 Male, age 80, left hemisphere 17.7
2148 Female, age 91, left hemisphere 16.3
1911 Female, age 85, right hemisphere 16.0
Dentate gyrus
nTPM: 20.6
2530 Female, age 94, left hemisphere 35.8
2010 Male, age 76, both hemispheres 22.9
2528 Male, age 74, both hemispheres 19.0
2531 Female, age 67, both hemispheres 19.0
2246 Female, age 85, both hemispheres 17.6
1927 Female, age 91, both hemispheres 9.4
Entorhinal gyrus
nTPM: 26.3
2613 Female, age 94, left hemisphere 41.0
2764 Male, age 80, right hemisphere 32.1
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 18.5
1938 Female, age 85, left hemisphere 17.4
2686 Male, age 75, right hemisphere 17.1
Hippocampus, CA1
nTPM: 14.9
2527 Male, age 74, both hemispheres 19.4
2749 Male, age 80, left hemisphere 16.8
1873 Female, age 85, both hemispheres 14.2
2082 Female, age 91, right hemisphere 14.0
2045 Male, age 76, both hemispheres 10.2
Hippocampus, CA2
nTPM: 17.7
2437 Female, age 94, left hemisphere 24.9
1963 Male, age 80, left hemisphere 20.1
2249 Male, age 74, both hemispheres 18.7
1892 Male, age 76, both hemispheres 15.3
1940 Female, age 85, left hemisphere 13.9
2113 Female, age 91, right hemisphere 13.3
Hippocampus, CA3
nTPM: 15.2
1891 Female, age 85, both hemispheres 19.8
2620 Female, age 94, left hemisphere 19.1
1867 Male, age 76, both hemispheres 16.1
2861 Female, age 67, both hemispheres 15.7
2137 Male, age 80, left hemisphere 10.6
2436 Male, age 74, both hemispheres 10.2
Parahippocampal cortex
nTPM: 18.3
2692 Male, age 74, both hemispheres 29.0
2532 Female, age 72, left hemisphere 27.8
2245 Female, age 91, both hemispheres 19.7
2693 Female, age 94, both hemispheres 18.6
1990 Female, age 91, right hemisphere 18.3
1850 Male, age 80, both hemispheres 16.0
2018 Male, age 76, both hemispheres 14.5
2622 Female, age 67, right hemisphere 14.4
1933 Female, age 85, both hemispheres 14.2
2250 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 12.6
2521 Female, age 94, right hemisphere 19.7
1794 Male, age 80, right hemisphere 13.9
1847 Female, age 91, left hemisphere 11.1
2848 Male, age 76, right hemisphere 11.1
1841 Female, age 85, right hemisphere 7.1
Subiculum
nTPM: 25.2
2042 Male, age 76, both hemispheres 34.0
1901 Male, age 80, both hemispheres 30.1
2438 Female, age 94, left hemisphere 27.5
2619 Male, age 74, both hemispheres 23.4
1977 Female, age 85, both hemispheres 23.0
2729 Female, age 91, right hemisphere 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 102.7
Min nTPM: 9.7
Std nTPM: 14.0
Median nTPM: 31.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 102.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 96.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 81.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 73.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 72.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 64.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 61.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 61.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 59.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 57.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.7
FF:10153-102I9 76 years, female 61.5
FF:10169-103B7 60 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 31.8
Min nTPM: 12.9
Sample A Female 31.8
Sample B Female 21.2
Sample C Male 24.5
Sample D Male 12.9
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.6
Sample A Female 13.1
Sample B Female 13.3
Sample C Male 15.7
Sample D Male 12.6
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 21.3
Min nTPM: 11.9
Sample A Female 21.3
Sample B Female 16.2
Sample C Male 17.5
Sample D Male 11.9
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 25.2
Min nTPM: 11.5
Sample A Female 18.1
Sample B Female 11.5
Sample C Male 25.2
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.8
Sample A Male 10.9
Sample B Male 10.8
Sample C Female 10.0
Sample D Female 9.8
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.0
Sample A Male 9.0
Sample B Male 11.4
Sample C Female 11.6
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70565867 Antisense, RP_050628_01_E07, Mouse strain C57BL/6J (56 days, male) 0.7

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