HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:174.2 nTPM
HPA:174.2 nTPM
GTEx:217.0 nTPM
FANTOM5:193.0 Scaled Tags Per Million
Pig:139.8 nTPM
Mouse:167.6 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003894Antibody HPA005437Antibody CAB001945
Glial cells HighHighHigh
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 174.2
Sample id Sample description nTPM
Hippocampus
nTPM: 160.2
2148 Female, age 91, left hemisphere 172.0
2621 Female, age 67, right hemisphere 169.2
1898 Male, age 80, left hemisphere 160.5
1911 Female, age 85, right hemisphere 159.6
1855 Male, age 76, left hemisphere 149.9
2529 Female, age 94, left hemisphere 149.8
Dentate gyrus
nTPM: 162.5
2530 Female, age 94, left hemisphere 183.3
2531 Female, age 67, both hemispheres 169.5
2010 Male, age 76, both hemispheres 168.2
2528 Male, age 74, both hemispheres 152.9
1927 Female, age 91, both hemispheres 152.5
2246 Female, age 85, both hemispheres 148.4
Entorhinal gyrus
nTPM: 173.6
2117 Female, age 91, right hemisphere 202.7
2764 Male, age 80, right hemisphere 185.1
2613 Female, age 94, left hemisphere 175.3
1787 Male, age 76, left hemisphere 162.8
1938 Female, age 85, left hemisphere 158.6
2686 Male, age 75, right hemisphere 157.2
Hippocampus, CA1
nTPM: 151.0
2749 Male, age 80, left hemisphere 160.6
1873 Female, age 85, both hemispheres 156.9
2527 Male, age 74, both hemispheres 148.8
2082 Female, age 91, right hemisphere 147.9
2045 Male, age 76, both hemispheres 140.9
Hippocampus, CA2
nTPM: 163.1
1963 Male, age 80, left hemisphere 181.6
1940 Female, age 85, left hemisphere 169.7
2437 Female, age 94, left hemisphere 168.2
2113 Female, age 91, right hemisphere 154.8
2249 Male, age 74, both hemispheres 152.4
1892 Male, age 76, both hemispheres 152.0
Hippocampus, CA3
nTPM: 151.2
1891 Female, age 85, both hemispheres 175.9
2620 Female, age 94, left hemisphere 168.0
1867 Male, age 76, both hemispheres 154.6
2861 Female, age 67, both hemispheres 145.3
2137 Male, age 80, left hemisphere 140.2
2436 Male, age 74, both hemispheres 123.0
Parahippocampal cortex
nTPM: 158.5
1990 Female, age 91, right hemisphere 176.0
2250 Female, age 67, right hemisphere 172.2
2532 Female, age 72, left hemisphere 167.2
2692 Male, age 74, both hemispheres 166.7
2018 Male, age 76, both hemispheres 162.0
1933 Female, age 85, both hemispheres 155.5
2245 Female, age 91, both hemispheres 154.6
2693 Female, age 94, both hemispheres 153.5
1850 Male, age 80, both hemispheres 146.0
2622 Female, age 67, right hemisphere 131.1
Perirhinal gyrus
nTPM: 146.5
2521 Female, age 94, right hemisphere 170.3
1847 Female, age 91, left hemisphere 147.8
1794 Male, age 80, right hemisphere 146.4
2848 Male, age 76, right hemisphere 136.7
1841 Female, age 85, right hemisphere 131.3
Subiculum
nTPM: 174.2
2042 Male, age 76, both hemispheres 198.2
1901 Male, age 80, both hemispheres 188.3
1977 Female, age 85, both hemispheres 186.0
2619 Male, age 74, both hemispheres 160.7
2729 Female, age 91, right hemisphere 156.2
2438 Female, age 94, left hemisphere 156.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 217.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 217.0
Samples: 197

Max nTPM: 666.2
Min nTPM: 86.9
Std nTPM: 83.6
Median nTPM: 200.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 666.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 515.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 490.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 471.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 461.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 400.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 399.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 398.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 375.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 369.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 359.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.0
FF:10153-102I9 76 years, female 216.6
FF:10169-103B7 60 years, female 169.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 139.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 139.8
Samples: 4

Max nTPM: 182.0
Min nTPM: 93.1
Sample A Female 182.0
Sample B Female 129.4
Sample C Male 154.6
Sample D Male 93.1
Entorhinal cortex
nTPM: 88.5
Samples: 4

Max nTPM: 91.7
Min nTPM: 85.2
Sample A Female 85.2
Sample B Female 90.4
Sample C Male 86.5
Sample D Male 91.7
Subiculum
nTPM: 85.3
Samples: 4

Max nTPM: 98.4
Min nTPM: 79.2
Sample A Female 98.4
Sample B Female 83.4
Sample C Male 79.2
Sample D Male 80.2
Ventral hippocampus
nTPM: 114.1
Samples: 4

Max nTPM: 146.6
Min nTPM: 76.6
Sample A Female 117.0
Sample B Female 76.6
Sample C Male 116.0
Sample D Male 146.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 167.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.1
Samples: 4

Max nTPM: 139.4
Min nTPM: 110.1
Sample A Male 139.4
Sample B Male 130.6
Sample C Female 128.1
Sample D Female 110.1
Hippocampal formation
nTPM: 167.6
Samples: 4

Max nTPM: 191.4
Min nTPM: 147.9
Sample A Male 147.9
Sample B Male 162.7
Sample C Female 191.4
Sample D Female 168.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
69529292 Antisense, RP_050421_03_H11, Mouse strain C57BL/6J (56 days, male) 17.4

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