HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:113.7 nTPM
HPA:113.7 nTPM
GTEx:153.8 nTPM
FANTOM5:142.4 Scaled Tags Per Million
Mouse:62.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063133Antibody HPA067561
Glial cells HighMedium
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.7
Sample id Sample description nTPM
Hippocampus
nTPM: 109.0
2529 Female, age 94, left hemisphere 113.9
2621 Female, age 67, right hemisphere 111.0
1855 Male, age 76, left hemisphere 110.5
1911 Female, age 85, right hemisphere 109.3
1898 Male, age 80, left hemisphere 106.6
2148 Female, age 91, left hemisphere 102.8
Dentate gyrus
nTPM: 113.7
2530 Female, age 94, left hemisphere 154.6
2010 Male, age 76, both hemispheres 121.7
2531 Female, age 67, both hemispheres 112.9
2246 Female, age 85, both hemispheres 104.3
2528 Male, age 74, both hemispheres 95.2
1927 Female, age 91, both hemispheres 93.9
Entorhinal gyrus
nTPM: 109.4
2686 Male, age 75, right hemisphere 129.9
2117 Female, age 91, right hemisphere 115.4
1787 Male, age 76, left hemisphere 104.9
2613 Female, age 94, left hemisphere 103.8
2764 Male, age 80, right hemisphere 101.8
1938 Female, age 85, left hemisphere 100.5
Hippocampus, CA1
nTPM: 101.2
1873 Female, age 85, both hemispheres 105.2
2045 Male, age 76, both hemispheres 104.1
2527 Male, age 74, both hemispheres 99.9
2082 Female, age 91, right hemisphere 99.1
2749 Male, age 80, left hemisphere 98.0
Hippocampus, CA2
nTPM: 104.7
2437 Female, age 94, left hemisphere 111.0
1940 Female, age 85, left hemisphere 106.2
1963 Male, age 80, left hemisphere 106.2
1892 Male, age 76, both hemispheres 104.4
2113 Female, age 91, right hemisphere 101.8
2249 Male, age 74, both hemispheres 98.9
Hippocampus, CA3
nTPM: 98.6
1891 Female, age 85, both hemispheres 109.3
1867 Male, age 76, both hemispheres 104.0
2861 Female, age 67, both hemispheres 103.9
2620 Female, age 94, left hemisphere 92.1
2137 Male, age 80, left hemisphere 91.5
2436 Male, age 74, both hemispheres 91.1
Parahippocampal cortex
nTPM: 102.9
2018 Male, age 76, both hemispheres 113.1
2692 Male, age 74, both hemispheres 111.8
2532 Female, age 72, left hemisphere 111.1
2245 Female, age 91, both hemispheres 107.3
2622 Female, age 67, right hemisphere 107.2
1990 Female, age 91, right hemisphere 99.2
1933 Female, age 85, both hemispheres 98.3
1850 Male, age 80, both hemispheres 96.7
2250 Female, age 67, right hemisphere 93.2
2693 Female, age 94, both hemispheres 91.1
Perirhinal gyrus
nTPM: 92.7
2848 Male, age 76, right hemisphere 100.3
1841 Female, age 85, right hemisphere 92.2
1794 Male, age 80, right hemisphere 91.2
1847 Female, age 91, left hemisphere 90.1
2521 Female, age 94, right hemisphere 89.6
Subiculum
nTPM: 113.1
2042 Male, age 76, both hemispheres 129.9
2438 Female, age 94, left hemisphere 124.1
1901 Male, age 80, both hemispheres 117.1
1977 Female, age 85, both hemispheres 105.4
2619 Male, age 74, both hemispheres 102.4
2729 Female, age 91, right hemisphere 99.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 153.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 153.8
Samples: 197

Max nTPM: 720.9
Min nTPM: 35.8
Std nTPM: 89.5
Median nTPM: 131.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 720.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 513.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 486.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 434.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 370.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 365.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 357.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 353.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 339.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 331.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 325.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.4
FF:10153-102I9 76 years, female 156.1
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.6
Samples: 4

Max nTPM: 59.4
Min nTPM: 52.6
Sample A Male 58.3
Sample B Male 52.6
Sample C Female 59.4
Sample D Female 56.2
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 64.1
Min nTPM: 58.9
Sample A Male 64.0
Sample B Male 62.3
Sample C Female 64.1
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71574416 Antisense, RP_050915_03_F09, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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