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ANP32B
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:142.6 nTPM
HPA:142.6 nTPM
FANTOM5:266.4 Scaled Tags Per Million
Mouse:73.0 nTPM
Allen mouse:0.1 Expression energy

THALAMUS - HPA Brain RNA-seq
Max nTPM 142.6
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 122.5
2497 Male, age 66, unknown 131.6
2032 Female, age 42, unknown 118.8
2396 Male, age 61, right hemisphere 117.1
Centromedial thalamic nucleus
nTPM: 131.9
2279 Female, age 85, left hemisphere 153.0
2401 Male, age 76, right hemisphere 110.7
Habenula
nTPM: 105.1
2203 Male, age 61, left hemisphere 107.5
1957 Male, age 80, both hemispheres 105.7
2252 Male, age 62, unknown 105.4
2276 Male, age 66, unknown 101.9
Lateral geniculate body
nTPM: 126.9
2659 Male, age 66, unknown 141.7
2575 Female, age 94, right hemisphere 140.1
2841 Male, age 80, both hemispheres 137.0
2857 Male, age 74, right hemisphere 137.0
1953 Male, age 62, unknown 121.7
2035 Female, age 72, unknown 120.8
2399 Male, age 61, left hemisphere 116.2
2106 Female, age 67, right hemisphere 100.2
Lateral thalamic nuclei
nTPM: 127.7
2661 Female, age 72, unknown 145.6
2577 Male, age 74, both hemispheres 135.4
2573 Female, age 94, left hemisphere 135.2
2765 Female, age 67, both hemispheres 111.8
1903 Male, age 76, left hemisphere 110.8
Medial dorsal thalamic nucleus
nTPM: 116.8
2572 Female, age 94, right hemisphere 153.5
2660 Female, age 72, unknown 147.0
2576 Male, age 74, both hemispheres 124.5
2492 Male, age 75, right hemisphere 118.0
1930 Female, age 42, unknown 115.1
2039 Female, age 72, unknown 113.7
2283 Male, age 80, right hemisphere 112.2
1810 Male, age 48, unknown 111.1
1859 Male, age 76, both hemispheres 109.7
2498 Male, age 66, unknown 107.9
2026 Male, age 62, unknown 105.9
2402 Female, age 67, both hemispheres 101.5
1971 Male, age 61, right hemisphere 98.4
Medial geniculate body
nTPM: 128.4
2571 Male, age 75, right hemisphere 151.7
2217 Female, age 72, unknown 135.5
2207 Male, age 80, right hemisphere 134.4
2650 Female, age 94, left hemisphere 126.8
2657 Male, age 74, right hemisphere 123.1
2049 Male, age 76, both hemispheres 122.4
1811 Female, age 42, unknown 104.6
Nucleus reuniens
nTPM: 140.2
2210 Female, age 85, left hemisphere 184.2
2205 Male, age 80, left hemisphere 135.5
2212 Female, age 67, left hemisphere 100.8
Nucleus rhomboideus
nTPM: 135.5
2280 Female, age 85, left hemisphere 188.6
2206 Male, age 80, both hemispheres 110.4
2213 Female, age 67, left hemisphere 107.6
Posterior thalamic nucleus
nTPM: 142.6
2649 Female, age 94, both hemispheres 209.2
2655 Male, age 74, right hemisphere 138.2
2266 Male, age 76, right hemisphere 117.9
2495 Female, age 67, right hemisphere 105.1
Pulvinar
nTPM: 117.7
2724 Male, age 74, right hemisphere 138.5
1932 Male, age 80, right hemisphere 118.7
2214 Male, age 76, right hemisphere 117.6
2499 Male, age 66, unknown 116.1
1929 Male, age 48, unknown 116.0
2496 Female, age 67, right hemisphere 116.0
1899 Female, age 42, unknown 115.1
2582 Female, age 72, unknown 115.1
1972 Male, age 62, unknown 112.0
2398 Male, age 61, left hemisphere 111.7
Subthalamic nucleus
nTPM: 133.1
2658 Male, age 74, both hemispheres 153.3
2216 Male, age 48, unknown 146.4
2124 Male, age 62, unknown 139.3
2275 Male, age 66, unknown 135.3
2056 Female, age 72, unknown 133.7
2282 Male, age 61, both hemispheres 130.6
2779 Female, age 42, unknown 124.2
2406 Female, age 72, unknown 101.7
Ventral posterolateral thalamic nucleus
nTPM: 122.6
2581 Female, age 72, unknown 142.7
2578 Male, age 74, both hemispheres 135.8
2570 Male, age 75, right hemisphere 125.4
2740 Male, age 76, right hemisphere 113.2
2397 Male, age 61, right hemisphere 110.7
2197 Male, age 80, both hemispheres 107.5
Ventral posteromedial thalamic nucleus
nTPM: 116.3
2653 Male, age 74, both hemispheres 131.8
2281 Male, age 75, right hemisphere 124.0
2127 Male, age 76, right hemisphere 121.6
2758 Male, age 80, both hemispheres 104.8
2202 Male, age 61, left hemisphere 99.1
Ventral thalamic nuclei
nTPM: 129.7
2580 Male, age 66, unknown 146.8
2291 Female, age 72, unknown 137.6
2858 Female, age 72, unknown 136.9
2204 Male, age 80, both hemispheres 135.2
2652 Male, age 74, left hemisphere 133.4
1845 Male, age 48, unknown 122.3
1860 Male, age 76, both hemispheres 120.1
1912 Female, age 42, unknown 118.0
2285 Male, age 62, unknown 116.8
Ventromedial nucleus
nTPM: 93.6
1822 Female, age 42, unknown 94.0
1982 Female, age 72, unknown 93.1
Zona incerta
nTPM: 140.7
2822 Male, age 74, right hemisphere 172.0
2663 Female, age 72, unknown 153.0
2403 Male, age 62, unknown 140.3
2215 Male, age 66, unknown 125.6
2208 Male, age 80, right hemisphere 112.8

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 266.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 266.4
FF:10154-103A1 76 years, female 266.4

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 73.0
Mouse sample Sample description nTPM
Thalamus
nTPM: 73.0
Samples: 4

Max nTPM: 77.9
Min nTPM: 69.8
Sample A Male 69.8
Sample B Male 71.8
Sample C Female 77.9
Sample D Female 72.4

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 0.1
71574416 Antisense, RP_050915_03_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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