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RPL35
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1462.7 nTPM
HPA:1462.7 nTPM
GTEx:1698.7 nTPM
FANTOM5:320.3 Scaled Tags Per Million
Pig:193.8 nTPM
Mouse:244.5 nTPM
Allen mouse:1.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1462.7
Sample id Sample description nTPM
Amygdala
nTPM: 1462.7
2695 Female, age 67, right hemisphere 1518.4
2514 Male, age 75, right hemisphere 1474.0
2517 Female, age 94, left hemisphere 1453.6
2814 Male, age 76, right hemisphere 1443.3
1987 Female, age 91, left hemisphere 1424.6
Basal amygdala
nTPM: 1434.6
2827 Female, age 67, right hemisphere 1488.6
2609 Male, age 75, right hemisphere 1466.2
2685 Female, age 94, left hemisphere 1425.0
2110 Male, age 80, left hemisphere 1421.7
2243 Female, age 91, right hemisphere 1408.3
1955 Male, age 76, both hemispheres 1397.8
Central amygdala
nTPM: 1453.7
2826 Female, age 94, left hemisphere 1566.7
2515 Male, age 75, right hemisphere 1452.8
2239 Male, age 80, left hemisphere 1426.4
1905 Male, age 76, both hemispheres 1417.5
2701 Female, age 91, right hemisphere 1404.9
Corticomedial amygdala
nTPM: 1415.6
2428 Male, age 75, right hemisphere 1436.4
2535 Female, age 67, right hemisphere 1436.2
2429 Female, age 94, left hemisphere 1413.3
2829 Male, age 80, left hemisphere 1410.0
2240 Male, age 76, both hemispheres 1401.6
2242 Female, age 91, right hemisphere 1395.9
Lateral amygdala
nTPM: 1451.5
2830 Female, age 67, right hemisphere 1530.8
2516 Male, age 75, right hemisphere 1494.3
2534 Female, age 94, left hemisphere 1488.0
2256 Male, age 80, left hemisphere 1427.4
2255 Female, age 91, right hemisphere 1391.4
1883 Male, age 76, both hemispheres 1377.1
Stria terminalis, bed nucleus
nTPM: 1394.9
1974 Female, age 91, both hemispheres 1425.7
2201 Male, age 74, unknown 1401.0
2486 Female, age 94, both hemispheres 1358.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1698.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1698.7
Samples: 152

Max nTPM: 5549.8
Min nTPM: 708.0
Std nTPM: 847.9
Median nTPM: 1447.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 5549.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 5427.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 4488.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 4320.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 4275.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3602.1
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 3426.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 3342.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 3317.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 3244.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 3227.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 3087.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2963.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2880.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 2879.2
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 2619.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 2608.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2594.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2510.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2374.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 2346.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 2342.6
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 2342.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 2333.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2329.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 2309.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 2305.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 2270.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 2270.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 2243.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 2049.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 2042.3
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 2030.0
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 2027.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 2023.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 2007.1
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1994.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1980.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1977.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1971.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1947.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1922.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1892.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1876.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1864.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1793.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1791.9
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1791.1
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1771.5
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1760.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1753.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1752.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1732.5
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1729.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1726.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1699.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1689.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1686.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1682.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1671.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1650.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1650.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1649.8
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1617.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1612.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1592.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1563.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1538.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1527.1
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1516.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1508.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1474.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1473.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1469.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1450.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1450.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1444.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1436.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1430.6
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1410.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1398.6
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1390.9
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1381.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1378.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1374.3
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1358.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1354.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1348.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1345.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1344.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1334.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1333.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1331.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1319.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 1318.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1315.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1306.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1290.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1259.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1259.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1254.7
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1235.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1231.5
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1223.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1220.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1210.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1202.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1195.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1185.4
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1174.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1152.8
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1146.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1139.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1139.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1134.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1128.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1124.3
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1110.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1105.7
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1099.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1088.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1080.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1077.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1053.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1043.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1043.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1043.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1017.9
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 1010.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1000.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1000.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 984.6
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 981.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 974.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 970.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 964.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 953.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 949.1
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 941.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 933.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 924.4
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 917.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 907.4
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 900.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 877.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 841.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 835.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 800.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 783.6
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 769.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 729.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 708.0
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 320.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 320.3
FF:10151-102I7 76 years, female 320.3

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 193.8
Pig sample Sample description nTPM
Amygdala
nTPM: 193.8
Samples: 4

Max nTPM: 251.8
Min nTPM: 107.1
Sample A Female 251.8
Sample B Female 216.2
Sample C Male 200.1
Sample D Male 107.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 244.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 244.5
Samples: 4

Max nTPM: 259.3
Min nTPM: 227.9
Sample A Male 234.2
Sample B Male 256.7
Sample C Female 259.3
Sample D Female 227.9

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.9
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 1.9

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