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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 605.4
Min nTPM: 54.2
Std nTPM: 135.9
Median nTPM:
452_1
88 years, female
605.4
353_1
82 years, female
539.4
218_1
71 years, female
531.2
163_1
78 years, male
525.9
321_1
62 years, female
520.8
354_1
81 years, female
519.5
351_1
91 years, male
518.7
319_1
81 years, male
512.4
355_1
70 years, female
511.0
352_1
62 years, male
510.1
356_1
87 years, female
477.4
377_1
82 years, female
467.9
320_1
89 years, female
465.5
349_1
83 years, male
460.8
350_1
84 years, female
460.5
386_1
76 years, male
442.4
394_1
75 years, female
431.7
243_1
75 years, male
424.4
295_1
61 years, female
412.5
376_1
75 years, female
401.4
322_1
76 years, male
393.1
506_1
65 years, male
390.1
172_1
72 years, female
378.2
177_1
74 years, male
371.3
447_1
81 years, male
369.1
251_1
78 years, male
363.4
292_1
71 years, male
348.3
503_1
68 years, male
348.0
293_1
68 years, female
347.0
318_1
68 years, male
345.2
335_1
73 years, female
343.4
379_1
60 years, male
339.8
286_1
68 years, female
338.4
384_1
83 years, male
337.3
406_1
79 years, male
336.6
237_1
82 years, male
333.4
2_1
77 years, female
329.8
6_1
73 years, female
320.5
4_1
88 years, female
319.6
99_1
64 years, male
310.1
317_1
60 years, male
303.8
173_1
67 years, male
302.4
517_1
88 years, male
300.3
425_1
59 years, female
299.6
189_1
76 years, male
295.9
389_1
86 years, female
291.0
404_1
82 years, female
288.2
264_1
73 years, female
284.7
115_1
83 years, male
279.6
405_1
91 years, male
277.4
480_1
63 years, male
270.5
348_1
84 years, male
269.6
35_1
74 years, female
261.7
316_1
62 years, male
261.2
153_1
70 years, female
248.1
291_1
76 years, male
247.3
396_1
62 years, male
247.1
17_1
71 years, male
245.1
375_1
74 years, female
244.8
526_1
61 years, male
244.5
229_1
69 years, female
237.2
246_1
77 years, male
236.5
137_1
83 years, male
221.2
254_1
77 years, female
219.1
145_1
84 years, male
214.2
120_1
70 years, female
212.8
18_1
88 years, male
211.7
468_1
89 years, male
205.0
41_1
94 years, female
202.7
265_1
87 years, male
200.7
217_1
76 years, male
198.9
347_1
72 years, male
188.3
9_1
66 years, female
183.3
311_1
78 years, male
181.0
126_1
63 years, male
180.1
109_1
81 years, female
177.9
266_1
85 years, male
176.5
288_1
66 years, female
173.9
518_1
75 years, female
172.5
314_1
67 years, male
161.6
42_1
85 years, male
161.2
139_1
64 years, female
143.4
307_1
66 years, female
138.7
117_1
61 years, male
134.4
324_1
76 years, male
128.2
162_1
79 years, female
122.2
81_1
67 years, male
121.6
315_1
62 years, female
120.3
313_1
79 years, female
120.1
499_1
55 years, female
114.2
119_1
70 years, female
108.0
142_1
61 years, female
104.8
495_1
57 years, female
104.1
308_1
70 years, female
104.0
32_1
67 years, male
100.2
89_1
63 years, male
95.7
43_1
64 years, female
95.6
466_1
57 years, female
94.5
414_1
84 years, female
93.3
415_1
77 years, female
88.9
501_1
88 years, male
74.4
149_1
88 years, male
72.0
413_1
59 years, female
70.4
491_1
89 years, female
62.4
490_1
67 years, female
54.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.