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RPL35
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

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No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1484.9 nTPM
HPA:1484.9 nTPM
FANTOM5:377.1 Scaled Tags Per Million
Pig:267.0 nTPM
Allen mouse:0.9 Expression energy

PONS - HPA Brain RNA-seq
Max nTPM 1484.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1448.7
2090 Male, age 80, both hemispheres 1479.6
2188 Female, age 91, both hemispheres 1476.9
2301 Female, age 85, both hemispheres 1450.1
1984 Male, age 76, both hemispheres 1388.3
Dorsal cochlear nucleus
nTPM: 1436.5
2187 Female, age 91, both hemispheres 1471.3
2802 Male, age 74, right hemisphere 1462.8
2370 Male, age 61, both hemispheres 1426.9
2378 Male, age 80, both hemispheres 1415.4
2058 Male, age 76, both hemispheres 1405.9
Dorsal tegmental nucleus
nTPM: 1475.6
2358 Male, age 61, both hemispheres 1525.1
2083 Male, age 80, both hemispheres 1483.5
2326 Male, age 74, both hemispheres 1466.1
1936 Male, age 76, left hemisphere 1427.9
Dorsolateral tegmental area
nTPM: 1453.2
2337 Male, age 61, both hemispheres 1526.8
2654 Male, age 80, both hemispheres 1480.7
2141 Male, age 76, both hemispheres 1432.5
2751 Female, age 85, both hemispheres 1425.7
2360 Male, age 74, both hemispheres 1400.5
Kolliker-Fuse nucleus
nTPM: 1443.6
2793 Female, age 91, left hemisphere 1454.6
2163 Male, age 80, both hemispheres 1444.5
2315 Male, age 76, right hemisphere 1431.6
Lateral lemniscal nuclei
nTPM: 1391.7
2169 Male, age 76, both hemispheres 1419.7
2320 Female, age 91, left hemisphere 1402.2
2453 Male, age 74, right hemisphere 1395.7
2746 Female, age 85, left hemisphere 1391.8
2036 Male, age 80, both hemispheres 1349.3
Lateral parabrachial nucleus
nTPM: 1447.7
2792 Male, age 76, both hemispheres 1486.5
2013 Male, age 80, both hemispheres 1459.7
2790 Male, age 61, both hemispheres 1424.8
2139 Female, age 85, right hemisphere 1419.9
Lateral vestibular nucleus
nTPM: 1445.9
2311 Male, age 80, both hemispheres 1492.7
2184 Male, age 76, both hemispheres 1399.2
Locus coeruleus
nTPM: 1434.7
2720 Male, age 74, both hemispheres 1478.8
2162 Male, age 80, both hemispheres 1455.1
2123 Female, age 91, both hemispheres 1446.9
2014 Male, age 55, unknown 1433.8
2317 Female, age 72, unknown 1414.7
1980 Male, age 76, both hemispheres 1413.4
2788 Male, age 74, unknown 1400.0
Medial olivary nucleus
nTPM: 1484.9
1943 Male, age 61, both hemispheres 1501.8
2851 Male, age 80, both hemispheres 1483.6
2138 Female, age 91, both hemispheres 1479.4
1962 Male, age 76, both hemispheres 1474.7
Medial parabrachial nucleus
nTPM: 1449.0
2170 Female, age 91, both hemispheres 1496.7
2854 Male, age 80, both hemispheres 1460.9
2156 Male, age 61, both hemispheres 1450.3
2786 Male, age 76, both hemispheres 1428.4
2463 Female, age 85, right hemisphere 1409.0
Medial periolivary nuclei
nTPM: 1399.3
2081 Male, age 80, both hemispheres 1425.2
2063 Male, age 76, both hemispheres 1411.3
2458 Female, age 91, both hemispheres 1408.6
2171 Female, age 85, both hemispheres 1379.8
2791 Male, age 74, right hemisphere 1371.7
Motor facial nucleus
nTPM: 1405.4
2697 Female, age 85, both hemispheres 1435.8
2126 Male, age 61, both hemispheres 1417.3
2365 Male, age 74, right hemisphere 1405.0
2795 Female, age 91, both hemispheres 1400.0
2062 Male, age 76, both hemispheres 1399.3
2327 Male, age 80, both hemispheres 1374.7
Motor trigeminal nucleus
nTPM: 1422.1
2335 Male, age 61, both hemispheres 1463.0
2321 Female, age 91, both hemispheres 1422.8
2309 Male, age 76, both hemispheres 1422.7
2560 Male, age 74, both hemispheres 1403.2
2079 Male, age 80, both hemispheres 1398.8
Nuclei of the trapezoid body
nTPM: 1396.7
1983 Male, age 76, both hemispheres 1463.3
2166 Male, age 80, both hemispheres 1411.3
2159 Male, age 61, both hemispheres 1377.8
2368 Female, age 91, both hemispheres 1372.1
2735 Female, age 85, both hemispheres 1358.8
Paramedian reticular nucleus
nTPM: 1427.8
2052 Male, age 76, both hemispheres 1458.7
2050 Female, age 85, both hemispheres 1424.7
2313 Male, age 61, both hemispheres 1419.4
2057 Male, age 80, both hemispheres 1408.3
Pontine nuclei
nTPM: 1411.0
2319 Female, age 91, both hemispheres 1450.2
1863 Male, age 55, unknown 1427.1
1968 Male, age 76, left hemisphere 1421.3
2454 Male, age 74, left hemisphere 1420.8
2115 Male, age 80, left hemisphere 1418.3
2787 Female, age 85, both hemispheres 1401.0
2109 Female, age 72, unknown 1390.9
2727 Male, age 61, right hemisphere 1358.4
Pontine raphe nucleus
nTPM: 1416.0
2853 Male, age 76, midline 1420.2
2122 Female, age 85, midline 1411.8
Posteroventral cochlear nucleus
nTPM: 1451.0
2135 Female, age 91, both hemispheres 1484.9
2341 Male, age 80, both hemispheres 1481.3
2371 Male, age 61, both hemispheres 1443.9
2070 Male, age 76, both hemispheres 1426.7
2752 Female, age 85, both hemispheres 1418.5
Principal sensory trigeminal nucleus
nTPM: 1400.4
2367 Female, age 91, left hemisphere 1421.2
2324 Male, age 76, both hemispheres 1413.3
2158 Male, age 61, both hemispheres 1394.9
2008 Male, age 80, left hemisphere 1372.2
Reticular pontine nucleus, caudal
nTPM: 1422.0
2457 Female, age 91, both hemispheres 1446.1
2559 Male, age 74, both hemispheres 1443.4
2092 Male, age 76, both hemispheres 1437.6
2332 Male, age 80, right hemisphere 1361.1
Reticular pontine nucleus, oral
nTPM: 1434.7
2366 Female, age 91, both hemispheres 1469.3
2167 Male, age 76, both hemispheres 1461.9
1939 Male, age 80, both hemispheres 1452.0
2012 Female, age 85, both hemispheres 1406.9
2361 Male, age 74, both hemispheres 1383.5
Reticulotegmental nucleus
nTPM: 1426.7
2452 Male, age 74, both hemispheres 1454.8
2322 Female, age 91, both hemispheres 1429.2
2333 Male, age 80, both hemispheres 1414.7
2325 Male, age 76, both hemispheres 1407.9
Spinal trigeminal nucleus, oral
nTPM: 1417.9
2164 Male, age 80, both hemispheres 1431.6
1978 Male, age 76, both hemispheres 1421.8
2737 Female, age 85, both hemispheres 1400.4
Subcoeruleus area
nTPM: 1436.2
2451 Male, age 74, both hemispheres 1472.9
2369 Female, age 85, left hemisphere 1440.8
2323 Female, age 91, left hemisphere 1436.8
1958 Male, age 80, both hemispheres 1436.6
2089 Male, age 76, left hemisphere 1394.0
Superior olive
nTPM: 1398.4
2020 Male, age 76, both hemispheres 1448.7
2561 Female, age 91, both hemispheres 1409.0
2364 Male, age 74, right hemisphere 1386.1
2329 Male, age 80, right hemisphere 1380.7
1875 Female, age 85, both hemispheres 1367.6
Superior vestibular nucleus
nTPM: 1444.4
2383 Male, age 74, both hemispheres 1458.1
2015 Male, age 80, both hemispheres 1454.7
2061 Male, age 76, both hemispheres 1420.5
Ventral periolivary nuclei
nTPM: 1411.8
2023 Male, age 76, both hemispheres 1424.0
2165 Male, age 80, both hemispheres 1422.5
2794 Female, age 91, left hemisphere 1403.2
2130 Female, age 85, both hemispheres 1397.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1412.9
2840 Female, age 85, both hemispheres 1434.2
2359 Male, age 61, both hemispheres 1425.8
1959 Male, age 76, both hemispheres 1419.4
2161 Male, age 80, both hemispheres 1414.1
2449 Male, age 74, both hemispheres 1395.6
2456 Female, age 91, both hemispheres 1388.7

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 377.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 377.1
FF:10182-103D2 60 years, female 406.8
FF:10165-103B3 76 years, female 347.4
Pons
Scaled Tags Per Million: 214.8
FF:10033-101E6 18-54 years, mixed 214.8

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 267.0
Pig sample Sample description nTPM
Pons
nTPM: 267.0
Samples: 4

Max nTPM: 311.9
Min nTPM: 194.6
Sample A Female 270.2
Sample B Female 194.6
Sample C Male 311.9
Sample D Male 291.4

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 0.9
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 0.9

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