HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:106.0 nTPM
HPA:106.0 nTPM
GTEx:104.7 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Pig:49.2 nTPM
Mouse:144.1 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044905
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.0
Sample id Sample description nTPM
Hippocampus
nTPM: 95.3
1898 Male, age 80, left hemisphere 105.9
1855 Male, age 76, left hemisphere 99.2
2621 Female, age 67, right hemisphere 95.3
2148 Female, age 91, left hemisphere 91.5
1911 Female, age 85, right hemisphere 91.0
2529 Female, age 94, left hemisphere 88.6
Dentate gyrus
nTPM: 96.5
1927 Female, age 91, both hemispheres 101.6
2010 Male, age 76, both hemispheres 100.1
2530 Female, age 94, left hemisphere 98.5
2528 Male, age 74, both hemispheres 94.1
2246 Female, age 85, both hemispheres 92.7
2531 Female, age 67, both hemispheres 91.7
Entorhinal gyrus
nTPM: 98.1
2764 Male, age 80, right hemisphere 105.8
1938 Female, age 85, left hemisphere 102.3
1787 Male, age 76, left hemisphere 99.9
2613 Female, age 94, left hemisphere 99.2
2686 Male, age 75, right hemisphere 91.6
2117 Female, age 91, right hemisphere 89.6
Hippocampus, CA1
nTPM: 100.0
2749 Male, age 80, left hemisphere 114.1
2045 Male, age 76, both hemispheres 101.8
1873 Female, age 85, both hemispheres 99.1
2527 Male, age 74, both hemispheres 94.8
2082 Female, age 91, right hemisphere 90.4
Hippocampus, CA2
nTPM: 97.3
1892 Male, age 76, both hemispheres 110.5
1963 Male, age 80, left hemisphere 101.5
2437 Female, age 94, left hemisphere 97.4
2249 Male, age 74, both hemispheres 93.7
1940 Female, age 85, left hemisphere 91.7
2113 Female, age 91, right hemisphere 89.0
Hippocampus, CA3
nTPM: 97.8
1867 Male, age 76, both hemispheres 103.5
2620 Female, age 94, left hemisphere 100.5
2137 Male, age 80, left hemisphere 98.0
1891 Female, age 85, both hemispheres 96.1
2436 Male, age 74, both hemispheres 96.0
2861 Female, age 67, both hemispheres 93.0
Parahippocampal cortex
nTPM: 96.3
1850 Male, age 80, both hemispheres 108.1
1933 Female, age 85, both hemispheres 101.4
1990 Female, age 91, right hemisphere 98.3
2018 Male, age 76, both hemispheres 97.3
2693 Female, age 94, both hemispheres 95.6
2245 Female, age 91, both hemispheres 94.6
2250 Female, age 67, right hemisphere 93.9
2532 Female, age 72, left hemisphere 93.8
2692 Male, age 74, both hemispheres 91.3
2622 Female, age 67, right hemisphere 89.1
Perirhinal gyrus
nTPM: 106.0
1847 Female, age 91, left hemisphere 115.6
1794 Male, age 80, right hemisphere 111.7
1841 Female, age 85, right hemisphere 105.2
2848 Male, age 76, right hemisphere 100.6
2521 Female, age 94, right hemisphere 96.8
Subiculum
nTPM: 92.6
1977 Female, age 85, both hemispheres 100.2
1901 Male, age 80, both hemispheres 98.3
2619 Male, age 74, both hemispheres 93.0
2042 Male, age 76, both hemispheres 89.8
2729 Female, age 91, right hemisphere 87.8
2438 Female, age 94, left hemisphere 86.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.7
Samples: 197

Max nTPM: 226.8
Min nTPM: 49.1
Std nTPM: 33.8
Median nTPM: 96.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 226.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 205.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 202.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 191.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 189.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 184.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 178.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 175.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 173.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 167.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 163.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.2
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 76.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.2
Samples: 4

Max nTPM: 67.4
Min nTPM: 39.1
Sample A Female 67.4
Sample B Female 48.4
Sample C Male 42.0
Sample D Male 39.1
Entorhinal cortex
nTPM: 43.7
Samples: 4

Max nTPM: 49.4
Min nTPM: 38.4
Sample A Female 48.3
Sample B Female 49.4
Sample C Male 38.5
Sample D Male 38.4
Subiculum
nTPM: 44.0
Samples: 4

Max nTPM: 58.2
Min nTPM: 38.2
Sample A Female 58.2
Sample B Female 38.2
Sample C Male 40.5
Sample D Male 39.2
Ventral hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 34.1
Sample A Female 48.1
Sample B Female 34.1
Sample C Male 51.0
Sample D Male 48.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 144.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 144.1
Samples: 4

Max nTPM: 158.4
Min nTPM: 134.4
Sample A Male 134.4
Sample B Male 158.4
Sample C Female 145.3
Sample D Female 138.2
Hippocampal formation
nTPM: 139.7
Samples: 4

Max nTPM: 157.0
Min nTPM: 124.8
Sample A Male 157.0
Sample B Male 130.1
Sample C Female 124.8
Sample D Female 146.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
69174493 Antisense, RP_050329_02_D09, Mouse strain C57BL/6J (56 days, male) 10.1

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