HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1155.2 nTPM
HPA:1155.2 nTPM
GTEx:1249.3 nTPM
FANTOM5:174.2 Scaled Tags Per Million
Pig:46.1 nTPM
Mouse:728.2 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031153Antibody CAB004027
Glial cells LowNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1155.2
Sample id Sample description nTPM
Hippocampus
nTPM: 1155.2
2621 Female, age 67, right hemisphere 1200.7
1898 Male, age 80, left hemisphere 1166.9
2529 Female, age 94, left hemisphere 1166.6
1911 Female, age 85, right hemisphere 1143.0
1855 Male, age 76, left hemisphere 1141.7
2148 Female, age 91, left hemisphere 1112.0
Dentate gyrus
nTPM: 1141.8
2530 Female, age 94, left hemisphere 1212.5
2010 Male, age 76, both hemispheres 1158.2
2531 Female, age 67, both hemispheres 1145.8
2246 Female, age 85, both hemispheres 1135.5
2528 Male, age 74, both hemispheres 1099.3
1927 Female, age 91, both hemispheres 1099.2
Entorhinal gyrus
nTPM: 1150.2
2686 Male, age 75, right hemisphere 1238.5
2117 Female, age 91, right hemisphere 1146.5
1787 Male, age 76, left hemisphere 1132.5
1938 Female, age 85, left hemisphere 1129.1
2764 Male, age 80, right hemisphere 1128.3
2613 Female, age 94, left hemisphere 1126.2
Hippocampus, CA1
nTPM: 1124.8
1873 Female, age 85, both hemispheres 1140.4
2082 Female, age 91, right hemisphere 1139.5
2045 Male, age 76, both hemispheres 1135.5
2527 Male, age 74, both hemispheres 1119.1
2749 Male, age 80, left hemisphere 1089.8
Hippocampus, CA2
nTPM: 1138.9
1963 Male, age 80, left hemisphere 1165.1
1940 Female, age 85, left hemisphere 1140.8
2437 Female, age 94, left hemisphere 1139.9
2113 Female, age 91, right hemisphere 1135.2
1892 Male, age 76, both hemispheres 1134.4
2249 Male, age 74, both hemispheres 1118.1
Hippocampus, CA3
nTPM: 1118.9
1891 Female, age 85, both hemispheres 1157.6
2861 Female, age 67, both hemispheres 1144.7
1867 Male, age 76, both hemispheres 1138.9
2436 Male, age 74, both hemispheres 1105.3
2137 Male, age 80, left hemisphere 1085.5
2620 Female, age 94, left hemisphere 1081.6
Parahippocampal cortex
nTPM: 1133.3
2018 Male, age 76, both hemispheres 1178.5
2692 Male, age 74, both hemispheres 1153.7
2532 Female, age 72, left hemisphere 1142.4
1850 Male, age 80, both hemispheres 1136.0
2250 Female, age 67, right hemisphere 1132.8
2622 Female, age 67, right hemisphere 1130.2
1933 Female, age 85, both hemispheres 1122.3
2245 Female, age 91, both hemispheres 1122.3
1990 Female, age 91, right hemisphere 1115.3
2693 Female, age 94, both hemispheres 1099.3
Perirhinal gyrus
nTPM: 1126.1
1841 Female, age 85, right hemisphere 1150.8
2848 Male, age 76, right hemisphere 1134.3
1847 Female, age 91, left hemisphere 1123.0
1794 Male, age 80, right hemisphere 1121.0
2521 Female, age 94, right hemisphere 1101.3
Subiculum
nTPM: 1154.6
2042 Male, age 76, both hemispheres 1203.0
2438 Female, age 94, left hemisphere 1177.7
1901 Male, age 80, both hemispheres 1147.9
1977 Female, age 85, both hemispheres 1144.7
2619 Male, age 74, both hemispheres 1131.2
2729 Female, age 91, right hemisphere 1123.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1249.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1249.3
Samples: 197

Max nTPM: 3304.5
Min nTPM: 487.7
Std nTPM: 501.5
Median nTPM: 1095.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3304.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3215.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2897.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2893.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2716.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2524.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2502.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2489.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2484.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2194.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2141.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 174.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 174.2
FF:10169-103B7 60 years, female 198.8
FF:10153-102I9 76 years, female 149.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 56.3
Min nTPM: 35.7
Sample A Female 56.3
Sample B Female 39.8
Sample C Male 52.5
Sample D Male 35.7
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 46.0
Min nTPM: 29.9
Sample A Female 36.9
Sample B Female 46.0
Sample C Male 42.9
Sample D Male 29.9
Subiculum
nTPM: 43.1
Samples: 4

Max nTPM: 55.7
Min nTPM: 36.1
Sample A Female 55.7
Sample B Female 39.8
Sample C Male 36.1
Sample D Male 40.9
Ventral hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 42.6
Min nTPM: 37.2
Sample A Female 40.6
Sample B Female 37.2
Sample C Male 39.6
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 728.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 668.6
Samples: 4

Max nTPM: 707.9
Min nTPM: 646.5
Sample A Male 672.8
Sample B Male 647.0
Sample C Female 707.9
Sample D Female 646.5
Hippocampal formation
nTPM: 728.2
Samples: 4

Max nTPM: 785.5
Min nTPM: 696.1
Sample A Male 785.5
Sample B Male 696.1
Sample C Female 706.7
Sample D Female 724.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 11.3

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