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RPS6
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1929.2 nTPM
HPA:1387.8 nTPM
GTEx:1929.2 nTPM
FANTOM5:364.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031153Antibody CAB004027
Glandular cells HighMedium





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1387.8
overview
Male, age 65
Small intestine sample 232
nTPM: 1825.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1314
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1166.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1245.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1929.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1929.2
Samples: 187

Max nTPM: 4138.8
Min nTPM: 866.4
Std nTPM: 584.7
Median nTPM: 1803.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 4138.8
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4076.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3704.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3616.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3502.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3500.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3481.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3341.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 3290.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 3126.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3087.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3048.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2884.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2881.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2851.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2803.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2767.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2715.1
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2637.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2626.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2576.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2570.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2566.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2550.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2545.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2536.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2509.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2470.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2435.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2425.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2388.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2382.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2381.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2359.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2347.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2292.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2269.3
GTEX-1192X-2526-SM-59868 50-59 years, male 2251.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2249.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2248.3
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2237.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2229.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2217.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2207.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2200.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2194.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2185.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 2162.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2152.4
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2150.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2144.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2116.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2115.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2102.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2100.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2095.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 2094.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2087.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2077.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2052.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2041.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2032.7
GTEX-1C475-1426-SM-793CH 40-49 years, female 2032.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2031.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 2024.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2023.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2017.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2013.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1992.0
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1978.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1975.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1969.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1962.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1946.5
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1945.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1943.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1935.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1934.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1930.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1929.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1919.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1912.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1911.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1905.4
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1904.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1899.0
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1889.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1879.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1875.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1859.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1840.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1832.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1826.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1803.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1797.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1793.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1792.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1790.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1786.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1772.6
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1766.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1764.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1761.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1741.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1733.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1729.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1717.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1705.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1703.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1701.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1697.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1695.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1695.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1691.7
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1686.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1685.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1673.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1671.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1665.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1660.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1658.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1655.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1652.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1646.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1642.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1635.6
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1633.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1601.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1599.3
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1591.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1590.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1583.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1575.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1560.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1559.1
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1552.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1549.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1547.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1547.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1536.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1534.9
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1530.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1517.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1509.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1498.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1490.9
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1489.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1480.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1479.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1477.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1475.8
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1469.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1467.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1460.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 1459.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1450.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1434.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1422.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1421.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1400.8
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1384.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1378.7
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1359.4
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1351.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1345.5
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1344.7
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1332.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1325.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1322.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1319.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1316.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1313.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1308.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1282.7
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1262.1
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1251.6
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1247.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1244.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1206.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1167.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1149.8
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1139.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1037.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1017.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 972.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 958.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 866.4
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 364.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 364.8
FF:10024-101D6 15,40,85 years, mixed 364.8

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