HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:248.3 nTPM
HPA:248.3 nTPM
GTEx:402.9 nTPM
FANTOM5:389.7 Scaled Tags Per Million
Mouse:1116.5 nTPM
Allen mouse:25.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB015339
Glial cells Not detectedNot detectedHigh
Neuronal cells LowMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 248.3
Sample id Sample description nTPM
Hippocampus
nTPM: 157.4
1898 Male, age 80, left hemisphere 256.3
2529 Female, age 94, left hemisphere 163.9
2621 Female, age 67, right hemisphere 150.7
2148 Female, age 91, left hemisphere 141.7
1855 Male, age 76, left hemisphere 126.4
1911 Female, age 85, right hemisphere 105.5
Dentate gyrus
nTPM: 176.0
1927 Female, age 91, both hemispheres 215.7
2530 Female, age 94, left hemisphere 202.2
2246 Female, age 85, both hemispheres 169.0
2010 Male, age 76, both hemispheres 167.0
2528 Male, age 74, both hemispheres 165.1
2531 Female, age 67, both hemispheres 136.8
Entorhinal gyrus
nTPM: 193.5
2764 Male, age 80, right hemisphere 324.6
1938 Female, age 85, left hemisphere 221.8
2613 Female, age 94, left hemisphere 203.6
1787 Male, age 76, left hemisphere 179.3
2117 Female, age 91, right hemisphere 120.9
2686 Male, age 75, right hemisphere 110.8
Hippocampus, CA1
nTPM: 214.3
2749 Male, age 80, left hemisphere 406.3
2527 Male, age 74, both hemispheres 216.7
1873 Female, age 85, both hemispheres 176.1
2082 Female, age 91, right hemisphere 145.6
2045 Male, age 76, both hemispheres 126.7
Hippocampus, CA2
nTPM: 173.7
1963 Male, age 80, left hemisphere 257.6
2249 Male, age 74, both hemispheres 184.8
2437 Female, age 94, left hemisphere 176.2
1892 Male, age 76, both hemispheres 171.8
2113 Female, age 91, right hemisphere 134.8
1940 Female, age 85, left hemisphere 117.2
Hippocampus, CA3
nTPM: 156.7
2137 Male, age 80, left hemisphere 262.9
2436 Male, age 74, both hemispheres 165.0
1867 Male, age 76, both hemispheres 145.0
2861 Female, age 67, both hemispheres 137.8
1891 Female, age 85, both hemispheres 116.4
2620 Female, age 94, left hemisphere 113.2
Parahippocampal cortex
nTPM: 198.8
2245 Female, age 91, both hemispheres 278.4
1850 Male, age 80, both hemispheres 242.1
1990 Female, age 91, right hemisphere 239.1
1933 Female, age 85, both hemispheres 236.1
2250 Female, age 67, right hemisphere 217.5
2532 Female, age 72, left hemisphere 214.0
2622 Female, age 67, right hemisphere 153.4
2693 Female, age 94, both hemispheres 153.1
2018 Male, age 76, both hemispheres 133.1
2692 Male, age 74, both hemispheres 120.6
Perirhinal gyrus
nTPM: 248.3
1847 Female, age 91, left hemisphere 362.2
2521 Female, age 94, right hemisphere 261.4
1794 Male, age 80, right hemisphere 252.9
1841 Female, age 85, right hemisphere 201.8
2848 Male, age 76, right hemisphere 163.0
Subiculum
nTPM: 144.9
1977 Female, age 85, both hemispheres 225.1
1901 Male, age 80, both hemispheres 173.1
2619 Male, age 74, both hemispheres 148.8
2438 Female, age 94, left hemisphere 135.5
2042 Male, age 76, both hemispheres 94.1
2729 Female, age 91, right hemisphere 93.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 402.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 402.9
Samples: 197

Max nTPM: 1449.5
Min nTPM: 33.0
Std nTPM: 262.9
Median nTPM: 349.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1449.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1295.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1184.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1108.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1078.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1019.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 944.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 940.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 859.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 843.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 822.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 389.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 389.7
FF:10169-103B7 60 years, female 501.2
FF:10153-102I9 76 years, female 278.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1116.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 926.0
Samples: 4

Max nTPM: 1134.7
Min nTPM: 754.2
Sample A Male 754.2
Sample B Male 842.3
Sample C Female 972.8
Sample D Female 1134.7
Hippocampal formation
nTPM: 1116.5
Samples: 4

Max nTPM: 1149.5
Min nTPM: 1090.8
Sample A Male 1103.8
Sample B Male 1090.8
Sample C Female 1122.0
Sample D Female 1149.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.6
74819689 Antisense, RP_060315_02_H05, Mouse strain C57BL/6J (56 days, male) 27.0
69854163 Antisense, RP_050324_04_C01, Mouse strain C57BL/6J (56 days, male) 25.4
69838608 Antisense, RP_050310_02_C05, Mouse strain C57BL/6J (56 days, male) 24.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.