HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:103.7 nTPM
HPA:103.7 nTPM
GTEx:105.6 nTPM
FANTOM5:127.7 Scaled Tags Per Million
Pig:112.2 nTPM
Mouse:299.2 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023840Antibody CAB012245
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.7
Sample id Sample description nTPM
Hippocampus
nTPM: 96.8
1898 Male, age 80, left hemisphere 110.6
1855 Male, age 76, left hemisphere 97.6
1911 Female, age 85, right hemisphere 96.6
2148 Female, age 91, left hemisphere 94.3
2621 Female, age 67, right hemisphere 92.5
2529 Female, age 94, left hemisphere 89.0
Dentate gyrus
nTPM: 97.5
2010 Male, age 76, both hemispheres 108.7
1927 Female, age 91, both hemispheres 106.8
2528 Male, age 74, both hemispheres 96.9
2246 Female, age 85, both hemispheres 96.4
2530 Female, age 94, left hemisphere 91.7
2531 Female, age 67, both hemispheres 84.5
Entorhinal gyrus
nTPM: 87.5
1787 Male, age 76, left hemisphere 95.9
1938 Female, age 85, left hemisphere 94.3
2117 Female, age 91, right hemisphere 91.5
2764 Male, age 80, right hemisphere 85.3
2686 Male, age 75, right hemisphere 79.3
2613 Female, age 94, left hemisphere 78.7
Hippocampus, CA1
nTPM: 103.7
2749 Male, age 80, left hemisphere 123.4
1873 Female, age 85, both hemispheres 110.2
2045 Male, age 76, both hemispheres 102.7
2527 Male, age 74, both hemispheres 93.5
2082 Female, age 91, right hemisphere 88.7
Hippocampus, CA2
nTPM: 98.1
1963 Male, age 80, left hemisphere 106.9
1892 Male, age 76, both hemispheres 106.1
2249 Male, age 74, both hemispheres 100.0
1940 Female, age 85, left hemisphere 93.1
2437 Female, age 94, left hemisphere 91.6
2113 Female, age 91, right hemisphere 91.0
Hippocampus, CA3
nTPM: 97.0
2137 Male, age 80, left hemisphere 108.9
1867 Male, age 76, both hemispheres 106.9
1891 Female, age 85, both hemispheres 98.2
2436 Male, age 74, both hemispheres 97.7
2620 Female, age 94, left hemisphere 86.3
2861 Female, age 67, both hemispheres 83.9
Parahippocampal cortex
nTPM: 89.6
2018 Male, age 76, both hemispheres 100.1
1850 Male, age 80, both hemispheres 95.9
1990 Female, age 91, right hemisphere 92.9
1933 Female, age 85, both hemispheres 92.0
2250 Female, age 67, right hemisphere 91.7
2693 Female, age 94, both hemispheres 89.4
2245 Female, age 91, both hemispheres 88.7
2692 Male, age 74, both hemispheres 83.9
2532 Female, age 72, left hemisphere 81.8
2622 Female, age 67, right hemisphere 79.4
Perirhinal gyrus
nTPM: 93.2
1847 Female, age 91, left hemisphere 100.1
1841 Female, age 85, right hemisphere 93.8
1794 Male, age 80, right hemisphere 93.0
2521 Female, age 94, right hemisphere 92.0
2848 Male, age 76, right hemisphere 87.2
Subiculum
nTPM: 92.7
2042 Male, age 76, both hemispheres 102.3
2729 Female, age 91, right hemisphere 96.7
1901 Male, age 80, both hemispheres 95.0
1977 Female, age 85, both hemispheres 89.9
2619 Male, age 74, both hemispheres 88.0
2438 Female, age 94, left hemisphere 84.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.6
Samples: 197

Max nTPM: 190.8
Min nTPM: 44.9
Std nTPM: 26.1
Median nTPM: 102.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 190.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 183.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 179.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 165.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 163.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 162.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 160.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 159.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 156.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 155.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 154.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.7
FF:10169-103B7 60 years, female 160.0
FF:10153-102I9 76 years, female 95.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 98.4
Samples: 4

Max nTPM: 116.6
Min nTPM: 85.6
Sample A Female 116.6
Sample B Female 98.7
Sample C Male 85.6
Sample D Male 92.5
Entorhinal cortex
nTPM: 112.2
Samples: 4

Max nTPM: 144.3
Min nTPM: 85.3
Sample A Female 116.7
Sample B Female 144.3
Sample C Male 102.5
Sample D Male 85.3
Subiculum
nTPM: 87.0
Samples: 4

Max nTPM: 117.2
Min nTPM: 72.9
Sample A Female 117.2
Sample B Female 79.5
Sample C Male 72.9
Sample D Male 78.2
Ventral hippocampus
nTPM: 87.6
Samples: 4

Max nTPM: 101.0
Min nTPM: 71.4
Sample A Female 101.0
Sample B Female 71.4
Sample C Male 90.0
Sample D Male 88.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 299.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 211.4
Samples: 4

Max nTPM: 225.5
Min nTPM: 193.7
Sample A Male 212.1
Sample B Male 214.4
Sample C Female 225.5
Sample D Female 193.7
Hippocampal formation
nTPM: 299.2
Samples: 4

Max nTPM: 321.0
Min nTPM: 265.2
Sample A Male 314.0
Sample B Male 296.7
Sample C Female 321.0
Sample D Female 265.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
70744518 Antisense, RP_050725_02_B11, Mouse strain C57BL/6J (56 days, male) 16.1
68196966 Antisense, RP_040922_01_D02, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

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