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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2547.2 nTPM
GTEx:2547.2 nTPM
FANTOM5:3649.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003364
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2547.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2547.2
Samples: 156

Max nTPM: 7321.4
Min nTPM: 1264.3
Std nTPM: 694.2
Median nTPM: 2492.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 7321.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 4320.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 4002.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 3896.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3847.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 3823.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 3684.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 3604.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3596.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 3596.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3570.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 3512.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 3477.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3443.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3410.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 3403.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 3286.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 3246.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 3178.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 3144.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 3133.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 3126.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 3108.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 3092.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3084.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 3045.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3034.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 3031.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2988.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2987.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2930.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2926.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2902.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2900.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2888.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2888.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2861.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2855.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2852.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2840.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2839.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2824.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 2817.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2791.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2788.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 2783.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2767.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2759.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2753.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2753.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2738.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2730.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2720.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2699.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2688.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2679.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2679.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2668.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2666.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2662.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 2662.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 2629.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2623.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2605.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2603.5
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2594.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2593.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2584.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2564.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2560.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2556.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2552.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2551.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2525.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 2516.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2515.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2510.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2496.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 2487.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2473.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2473.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 2460.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 2453.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 2453.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2444.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2442.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2434.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 2429.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2409.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2404.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 2398.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2396.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2389.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2388.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2387.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2366.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2366.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2342.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 2324.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 2323.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2310.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2306.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2296.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 2296.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 2286.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2283.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2257.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2254.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2224.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2219.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 2202.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2184.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2181.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 2153.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2148.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 2142.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 2136.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2122.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 2119.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 2102.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 2078.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2077.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 2073.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2070.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2053.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 2048.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 2047.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 2042.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 2030.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 2010.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1976.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1960.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1911.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1886.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1859.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1842.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1835.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1788.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1785.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1760.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1755.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1730.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1700.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1677.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1667.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1662.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1659.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1651.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1633.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1564.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1442.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1424.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1406.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1406.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1398.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1264.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3649.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3649.2
FF:10204-103F6 68 years, female 3649.2

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The Human Protein Atlas project is funded
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