HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:105.5 nTPM
HPA:105.5 nTPM
GTEx:55.8 nTPM
FANTOM5:67.0 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:0.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042226Antibody HPA048158
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.5
Sample id Sample description nTPM
Hippocampus
nTPM: 103.4
1898 Male, age 80, left hemisphere 107.6
1855 Male, age 76, left hemisphere 104.3
2529 Female, age 94, left hemisphere 103.7
2621 Female, age 67, right hemisphere 102.9
2148 Female, age 91, left hemisphere 101.6
1911 Female, age 85, right hemisphere 100.4
Dentate gyrus
nTPM: 103.5
1927 Female, age 91, both hemispheres 105.2
2530 Female, age 94, left hemisphere 105.2
2010 Male, age 76, both hemispheres 104.7
2528 Male, age 74, both hemispheres 104.0
2246 Female, age 85, both hemispheres 102.8
2531 Female, age 67, both hemispheres 98.8
Entorhinal gyrus
nTPM: 102.1
2764 Male, age 80, right hemisphere 104.4
2117 Female, age 91, right hemisphere 103.6
1938 Female, age 85, left hemisphere 102.8
1787 Male, age 76, left hemisphere 102.3
2686 Male, age 75, right hemisphere 99.8
2613 Female, age 94, left hemisphere 99.6
Hippocampus, CA1
nTPM: 104.1
2527 Male, age 74, both hemispheres 107.4
1873 Female, age 85, both hemispheres 105.8
2749 Male, age 80, left hemisphere 105.3
2082 Female, age 91, right hemisphere 101.4
2045 Male, age 76, both hemispheres 100.8
Hippocampus, CA2
nTPM: 105.5
1963 Male, age 80, left hemisphere 109.7
2249 Male, age 74, both hemispheres 109.1
1892 Male, age 76, both hemispheres 105.7
2437 Female, age 94, left hemisphere 105.2
1940 Female, age 85, left hemisphere 103.8
2113 Female, age 91, right hemisphere 99.2
Hippocampus, CA3
nTPM: 103.3
2436 Male, age 74, both hemispheres 117.7
1867 Male, age 76, both hemispheres 105.6
1891 Female, age 85, both hemispheres 102.6
2137 Male, age 80, left hemisphere 101.8
2620 Female, age 94, left hemisphere 97.2
2861 Female, age 67, both hemispheres 95.0
Parahippocampal cortex
nTPM: 101.9
2250 Female, age 67, right hemisphere 104.0
2532 Female, age 72, left hemisphere 103.8
1850 Male, age 80, both hemispheres 103.3
2692 Male, age 74, both hemispheres 103.2
1933 Female, age 85, both hemispheres 102.5
2018 Male, age 76, both hemispheres 102.4
1990 Female, age 91, right hemisphere 101.8
2245 Female, age 91, both hemispheres 101.8
2693 Female, age 94, both hemispheres 100.5
2622 Female, age 67, right hemisphere 95.8
Perirhinal gyrus
nTPM: 103.8
2521 Female, age 94, right hemisphere 106.0
1841 Female, age 85, right hemisphere 105.1
1847 Female, age 91, left hemisphere 103.4
1794 Male, age 80, right hemisphere 103.1
2848 Male, age 76, right hemisphere 101.2
Subiculum
nTPM: 103.1
1901 Male, age 80, both hemispheres 106.8
1977 Female, age 85, both hemispheres 105.0
2438 Female, age 94, left hemisphere 104.6
2619 Male, age 74, both hemispheres 102.8
2042 Male, age 76, both hemispheres 99.9
2729 Female, age 91, right hemisphere 99.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.8
Samples: 197

Max nTPM: 198.2
Min nTPM: 29.7
Std nTPM: 16.6
Median nTPM: 53.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 198.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 110.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 107.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 102.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 100.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 92.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 88.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 85.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 83.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 83.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 78.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.0
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 61.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 25.6
Sample A Female 46.2
Sample B Female 26.8
Sample C Male 39.1
Sample D Male 25.6
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 47.3
Min nTPM: 26.3
Sample A Female 32.6
Sample B Female 47.3
Sample C Male 32.6
Sample D Male 26.3
Subiculum
nTPM: 31.5
Samples: 4

Max nTPM: 44.8
Min nTPM: 23.3
Sample A Female 44.8
Sample B Female 29.9
Sample C Male 28.1
Sample D Male 23.3
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 24.4
Sample A Female 30.3
Sample B Female 25.2
Sample C Male 32.2
Sample D Male 24.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 159.9
Samples: 4

Max nTPM: 172.6
Min nTPM: 140.0
Sample A Male 172.6
Sample B Male 168.7
Sample C Female 158.1
Sample D Female 140.0
Hippocampal formation
nTPM: 157.2
Samples: 4

Max nTPM: 171.1
Min nTPM: 134.4
Sample A Male 171.1
Sample B Male 154.0
Sample C Female 134.4
Sample D Female 169.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74000678 Antisense, RP_051219_02_E10, Mouse strain C57BL/6J (56 days, male) 0.6
Hippocampal formation
Expression energy: 0.6
74000678 Antisense, RP_051219_02_E10, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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