HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.0 nTPM
HPA:24.0 nTPM
GTEx:18.3 nTPM
FANTOM5:28.8 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:19.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 23.8
2529 Female, age 94, left hemisphere 27.4
2148 Female, age 91, left hemisphere 26.2
2621 Female, age 67, right hemisphere 23.6
1911 Female, age 85, right hemisphere 23.3
1898 Male, age 80, left hemisphere 22.1
1855 Male, age 76, left hemisphere 20.3
Dentate gyrus
nTPM: 24.0
2530 Female, age 94, left hemisphere 28.1
2528 Male, age 74, both hemispheres 27.0
2531 Female, age 67, both hemispheres 23.6
1927 Female, age 91, both hemispheres 22.2
2010 Male, age 76, both hemispheres 21.8
2246 Female, age 85, both hemispheres 21.0
Entorhinal gyrus
nTPM: 21.5
2117 Female, age 91, right hemisphere 24.7
2686 Male, age 75, right hemisphere 24.4
2764 Male, age 80, right hemisphere 20.5
1938 Female, age 85, left hemisphere 20.0
1787 Male, age 76, left hemisphere 19.8
2613 Female, age 94, left hemisphere 19.7
Hippocampus, CA1
nTPM: 20.8
2527 Male, age 74, both hemispheres 25.0
2082 Female, age 91, right hemisphere 22.5
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 17.4
2749 Male, age 80, left hemisphere 17.0
Hippocampus, CA2
nTPM: 22.9
2249 Male, age 74, both hemispheres 26.2
1963 Male, age 80, left hemisphere 24.7
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 22.6
1940 Female, age 85, left hemisphere 20.1
1892 Male, age 76, both hemispheres 19.1
Hippocampus, CA3
nTPM: 24.0
2436 Male, age 74, both hemispheres 28.7
2620 Female, age 94, left hemisphere 27.4
2861 Female, age 67, both hemispheres 26.9
1891 Female, age 85, both hemispheres 22.7
1867 Male, age 76, both hemispheres 20.4
2137 Male, age 80, left hemisphere 18.2
Parahippocampal cortex
nTPM: 20.4
2692 Male, age 74, both hemispheres 23.6
1990 Female, age 91, right hemisphere 22.0
2245 Female, age 91, both hemispheres 21.3
2018 Male, age 76, both hemispheres 21.1
2622 Female, age 67, right hemisphere 20.9
2532 Female, age 72, left hemisphere 20.4
1933 Female, age 85, both hemispheres 19.5
2693 Female, age 94, both hemispheres 19.0
1850 Male, age 80, both hemispheres 18.5
2250 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 18.2
1847 Female, age 91, left hemisphere 19.3
2521 Female, age 94, right hemisphere 18.7
1841 Female, age 85, right hemisphere 18.5
1794 Male, age 80, right hemisphere 17.3
2848 Male, age 76, right hemisphere 17.3
Subiculum
nTPM: 22.9
2042 Male, age 76, both hemispheres 26.2
2619 Male, age 74, both hemispheres 23.7
2729 Female, age 91, right hemisphere 23.1
2438 Female, age 94, left hemisphere 22.9
1901 Male, age 80, both hemispheres 21.5
1977 Female, age 85, both hemispheres 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 38.3
Min nTPM: 9.1
Std nTPM: 6.1
Median nTPM: 17.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 38.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 36.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 34.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 33.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 33.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 32.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.8
FF:10153-102I9 76 years, female 30.4
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 24.9
Min nTPM: 7.1
Sample A Female 24.1
Sample B Female 13.4
Sample C Male 24.9
Sample D Male 7.1
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 14.6
Sample A Female 15.7
Sample B Female 15.0
Sample C Male 14.6
Sample D Male 15.9
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.3
Sample A Female 14.3
Sample B Female 12.1
Sample C Male 10.3
Sample D Male 13.4
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 9.6
Sample A Female 15.3
Sample B Female 9.6
Sample C Male 18.3
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 20.4
Min nTPM: 16.9
Sample A Male 20.4
Sample B Male 16.9
Sample C Female 19.0
Sample D Female 20.0
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.7
Sample A Male 15.6
Sample B Male 12.7
Sample C Female 14.0
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
1823 Antisense, RP_040526_01_F12, Mouse strain C57BL/6J (56 days, male) 0.6
1822 Antisense, RP_040526_01_F12, Mouse strain C57BL/6J (56 days, male) 0.6

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