HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:9.4 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:45.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.5
1911 Female, age 85, right hemisphere 17.8
2529 Female, age 94, left hemisphere 15.5
1898 Male, age 80, left hemisphere 15.0
2148 Female, age 91, left hemisphere 15.0
1855 Male, age 76, left hemisphere 14.9
2621 Female, age 67, right hemisphere 14.9
Dentate gyrus
nTPM: 13.9
1927 Female, age 91, both hemispheres 16.3
2528 Male, age 74, both hemispheres 15.5
2246 Female, age 85, both hemispheres 15.1
2010 Male, age 76, both hemispheres 13.5
2531 Female, age 67, both hemispheres 11.7
2530 Female, age 94, left hemisphere 11.5
Entorhinal gyrus
nTPM: 15.5
2117 Female, age 91, right hemisphere 20.8
1938 Female, age 85, left hemisphere 19.9
2686 Male, age 75, right hemisphere 14.5
1787 Male, age 76, left hemisphere 13.7
2764 Male, age 80, right hemisphere 12.5
2613 Female, age 94, left hemisphere 11.6
Hippocampus, CA1
nTPM: 15.0
2527 Male, age 74, both hemispheres 18.1
1873 Female, age 85, both hemispheres 15.0
2749 Male, age 80, left hemisphere 14.9
2082 Female, age 91, right hemisphere 13.5
2045 Male, age 76, both hemispheres 13.3
Hippocampus, CA2
nTPM: 14.8
2249 Male, age 74, both hemispheres 18.5
1940 Female, age 85, left hemisphere 15.5
2113 Female, age 91, right hemisphere 15.1
1892 Male, age 76, both hemispheres 13.6
2437 Female, age 94, left hemisphere 13.2
1963 Male, age 80, left hemisphere 12.9
Hippocampus, CA3
nTPM: 16.4
2436 Male, age 74, both hemispheres 29.1
1891 Female, age 85, both hemispheres 16.2
1867 Male, age 76, both hemispheres 14.5
2137 Male, age 80, left hemisphere 14.3
2861 Female, age 67, both hemispheres 12.2
2620 Female, age 94, left hemisphere 12.1
Parahippocampal cortex
nTPM: 16.3
1933 Female, age 85, both hemispheres 19.8
2692 Male, age 74, both hemispheres 19.2
2250 Female, age 67, right hemisphere 18.8
2693 Female, age 94, both hemispheres 15.9
2622 Female, age 67, right hemisphere 15.5
1990 Female, age 91, right hemisphere 15.4
2245 Female, age 91, both hemispheres 15.2
1850 Male, age 80, both hemispheres 15.1
2018 Male, age 76, both hemispheres 14.8
2532 Female, age 72, left hemisphere 13.4
Perirhinal gyrus
nTPM: 15.5
1841 Female, age 85, right hemisphere 18.0
1794 Male, age 80, right hemisphere 16.0
2521 Female, age 94, right hemisphere 15.7
1847 Female, age 91, left hemisphere 14.6
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 15.2
2619 Male, age 74, both hemispheres 17.6
2729 Female, age 91, right hemisphere 16.9
1977 Female, age 85, both hemispheres 14.7
1901 Male, age 80, both hemispheres 14.2
2438 Female, age 94, left hemisphere 14.0
2042 Male, age 76, both hemispheres 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 34.5
Min nTPM: 0.9
Std nTPM: 6.3
Median nTPM: 8.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 34.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 32.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 31.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 28.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 27.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 24.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 21.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 21.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 21.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10153-102I9 76 years, female 43.4
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.4
Sample A Female 23.3
Sample B Female 17.4
Sample C Male 20.1
Sample D Male 25.4
Entorhinal cortex
nTPM: 35.4
Samples: 4

Max nTPM: 45.6
Min nTPM: 24.5
Sample A Female 24.5
Sample B Female 45.6
Sample C Male 40.3
Sample D Male 31.0
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 25.1
Min nTPM: 15.5
Sample A Female 23.4
Sample B Female 18.3
Sample C Male 15.5
Sample D Male 25.1
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.9
Sample A Female 19.6
Sample B Female 17.0
Sample C Male 16.9
Sample D Male 21.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 33.2
Sample A Male 41.5
Sample B Male 37.1
Sample C Female 33.2
Sample D Female 33.3
Hippocampal formation
nTPM: 45.3
Samples: 4

Max nTPM: 54.8
Min nTPM: 37.2
Sample A Male 42.4
Sample B Male 37.2
Sample C Female 46.9
Sample D Female 54.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69874090 Antisense, RP_050512_02_F05, Mouse strain C57BL/6J (56 days, male) 1.3

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