AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		132.141
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.3 nTPM
HPA:45.3 nTPM
GTEx:36.2 nTPM
FANTOM5:25.3 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:50.9 nTPM
Allen mouse:5.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB079000
Amygdala mean intensity 132.141
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 92.188
Basal medial amygdaloid nucleus 130.509
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 132.141
Cortical amygdala 128.856
Central amygdala 119.368
Medial amygdaloid nucleus 115.073

AMYGDALA - HPA Brain RNA-seq
Max nTPM 45.3
Sample id Sample description nTPM
Amygdala
nTPM: 41.8
2814 Male, age 76, right hemisphere 71.6
2695 Female, age 67, right hemisphere 37.0
2514 Male, age 75, right hemisphere 36.4
1987 Female, age 91, left hemisphere 33.3
2517 Female, age 94, left hemisphere 30.7
Basal amygdala
nTPM: 38.6
2110 Male, age 80, left hemisphere 44.1
1955 Male, age 76, both hemispheres 43.3
2609 Male, age 75, right hemisphere 36.4
2243 Female, age 91, right hemisphere 36.3
2685 Female, age 94, left hemisphere 36.2
2827 Female, age 67, right hemisphere 35.2
Central amygdala
nTPM: 44.1
1905 Male, age 76, both hemispheres 63.8
2701 Female, age 91, right hemisphere 44.7
2239 Male, age 80, left hemisphere 40.6
2515 Male, age 75, right hemisphere 35.7
2826 Female, age 94, left hemisphere 35.6
Corticomedial amygdala
nTPM: 36.3
2240 Male, age 76, both hemispheres 42.4
2429 Female, age 94, left hemisphere 36.6
2535 Female, age 67, right hemisphere 36.6
2428 Male, age 75, right hemisphere 35.3
2242 Female, age 91, right hemisphere 33.4
2829 Male, age 80, left hemisphere 33.2
Lateral amygdala
nTPM: 45.3
1883 Male, age 76, both hemispheres 78.5
2256 Male, age 80, left hemisphere 40.6
2534 Female, age 94, left hemisphere 39.6
2255 Female, age 91, right hemisphere 39.5
2516 Male, age 75, right hemisphere 38.1
2830 Female, age 67, right hemisphere 35.7
Stria terminalis, bed nucleus
nTPM: 40.7
2201 Male, age 74, unknown 43.9
1974 Female, age 91, both hemispheres 40.0
2486 Female, age 94, both hemispheres 38.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 36.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 36.2
Samples: 152

Max nTPM: 78.0
Min nTPM: 13.9
Std nTPM: 10.8
Median nTPM: 35.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 78.0
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 69.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 67.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 63.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 61.1
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 56.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 55.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 54.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 54.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 53.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 52.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 25.3
FF:10151-102I7 76 years, female 25.3

AMYGDALA - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Amygdala
nTPM: 29.8
Samples: 4

Max nTPM: 35.5
Min nTPM: 25.9
Sample A Female 35.5
Sample B Female 25.9
Sample C Male 29.1
Sample D Male 28.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 50.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 51.0
Samples: 4

Max nTPM: 79.2
Min nTPM: 36.8
Sample A Male 49.1
Sample B Male 36.8
Sample C Female 79.2
Sample D Female 38.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.3
75651233 Antisense, RP_060518_01_D11, Mouse strain C57BL/6J (56 days, male) 6.1
69262346 Antisense, RP_050303_02_C04, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.