HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		159.944
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.1 nTPM
HPA:40.1 nTPM
GTEx:49.9 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:40.3 nTPM
Mouse:67.2 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002779Antibody CAB016119
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079000
Hippocampal formation mean intensity 159.944
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 102.724
Molecular layer of the dentate gyrus 102.029
Granular dentate gyrus 95.816
CA1 - oriens layer 123.050
CA1 - pyramidal layer 89.131
CA1 - radiatum layer 125.058
CA2 - oriens layer 125.716
CA2 - pyramidal layer 104.164
CA2 - radiatum layer 136.308
CA3 - oriens layer 123.359
CA3 - pyramidal layer 99.182
CA3 - radiatum layer 123.291
Stratum lucidum 88.869
Lacunosum moleculare 92.841
Subiculum 95.717

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.1
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
2148 Female, age 91, left hemisphere 43.2
2621 Female, age 67, right hemisphere 39.5
1898 Male, age 80, left hemisphere 39.1
1855 Male, age 76, left hemisphere 32.0
2529 Female, age 94, left hemisphere 31.9
1911 Female, age 85, right hemisphere 29.9
Dentate gyrus
nTPM: 37.1
2528 Male, age 74, both hemispheres 41.0
2530 Female, age 94, left hemisphere 39.9
2531 Female, age 67, both hemispheres 39.9
1927 Female, age 91, both hemispheres 36.4
2246 Female, age 85, both hemispheres 32.9
2010 Male, age 76, both hemispheres 32.2
Entorhinal gyrus
nTPM: 38.7
2613 Female, age 94, left hemisphere 43.6
2686 Male, age 75, right hemisphere 42.3
2764 Male, age 80, right hemisphere 40.1
1787 Male, age 76, left hemisphere 35.5
1938 Female, age 85, left hemisphere 35.5
2117 Female, age 91, right hemisphere 35.5
Hippocampus, CA1
nTPM: 34.9
2527 Male, age 74, both hemispheres 37.8
2749 Male, age 80, left hemisphere 36.0
2082 Female, age 91, right hemisphere 35.9
2045 Male, age 76, both hemispheres 32.5
1873 Female, age 85, both hemispheres 32.1
Hippocampus, CA2
nTPM: 39.2
2437 Female, age 94, left hemisphere 47.6
1892 Male, age 76, both hemispheres 45.6
2249 Male, age 74, both hemispheres 39.0
1963 Male, age 80, left hemisphere 34.9
1940 Female, age 85, left hemisphere 34.0
2113 Female, age 91, right hemisphere 33.9
Hippocampus, CA3
nTPM: 38.0
2620 Female, age 94, left hemisphere 44.7
1867 Male, age 76, both hemispheres 43.4
2861 Female, age 67, both hemispheres 37.4
2436 Male, age 74, both hemispheres 37.0
1891 Female, age 85, both hemispheres 34.0
2137 Male, age 80, left hemisphere 31.8
Parahippocampal cortex
nTPM: 39.3
2692 Male, age 74, both hemispheres 45.7
1990 Female, age 91, right hemisphere 42.6
2693 Female, age 94, both hemispheres 42.3
2622 Female, age 67, right hemisphere 41.7
1850 Male, age 80, both hemispheres 41.2
2532 Female, age 72, left hemisphere 40.0
2245 Female, age 91, both hemispheres 37.6
2250 Female, age 67, right hemisphere 36.1
1933 Female, age 85, both hemispheres 34.4
2018 Male, age 76, both hemispheres 31.7
Perirhinal gyrus
nTPM: 37.9
2521 Female, age 94, right hemisphere 42.6
1794 Male, age 80, right hemisphere 39.5
1847 Female, age 91, left hemisphere 38.3
1841 Female, age 85, right hemisphere 35.6
2848 Male, age 76, right hemisphere 33.8
Subiculum
nTPM: 40.1
2438 Female, age 94, left hemisphere 49.0
2619 Male, age 74, both hemispheres 45.2
1901 Male, age 80, both hemispheres 39.5
1977 Female, age 85, both hemispheres 38.0
2729 Female, age 91, right hemisphere 36.9
2042 Male, age 76, both hemispheres 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.9
Samples: 197

Max nTPM: 148.3
Min nTPM: 17.4
Std nTPM: 20.3
Median nTPM: 45.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 148.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 139.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 122.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 121.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 115.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 97.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 95.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 94.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 93.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 90.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10169-103B7 60 years, female 34.5
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 45.1
Min nTPM: 19.4
Sample A Female 27.4
Sample B Female 23.3
Sample C Male 45.1
Sample D Male 19.4
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 54.3
Min nTPM: 31.7
Sample A Female 34.8
Sample B Female 54.3
Sample C Male 31.7
Sample D Male 40.3
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 39.4
Min nTPM: 22.9
Sample A Female 32.8
Sample B Female 22.9
Sample C Male 39.4
Sample D Male 24.9
Ventral hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 65.6
Min nTPM: 20.9
Sample A Female 47.2
Sample B Female 24.4
Sample C Male 65.6
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.8
Samples: 4

Max nTPM: 76.2
Min nTPM: 32.3
Sample A Male 76.2
Sample B Male 62.7
Sample C Female 56.1
Sample D Female 32.3
Hippocampal formation
nTPM: 67.3
Samples: 4

Max nTPM: 71.4
Min nTPM: 61.0
Sample A Male 61.0
Sample B Male 70.1
Sample C Female 71.4
Sample D Female 66.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
75651233 Antisense, RP_060518_01_D11, Mouse strain C57BL/6J (56 days, male) 7.5
69262346 Antisense, RP_050303_02_C04, Mouse strain C57BL/6J (56 days, male) 7.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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