HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.3 nTPM
HPA:62.3 nTPM
GTEx:63.3 nTPM
FANTOM5:65.9 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:56.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056461Antibody HPA065503
Glial cells HighMedium
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.8
2529 Female, age 94, left hemisphere 57.6
1911 Female, age 85, right hemisphere 56.7
1898 Male, age 80, left hemisphere 51.4
1855 Male, age 76, left hemisphere 51.3
2621 Female, age 67, right hemisphere 51.0
2148 Female, age 91, left hemisphere 48.8
Dentate gyrus
nTPM: 52.8
2530 Female, age 94, left hemisphere 63.0
2010 Male, age 76, both hemispheres 57.6
2528 Male, age 74, both hemispheres 54.9
2246 Female, age 85, both hemispheres 48.5
2531 Female, age 67, both hemispheres 47.9
1927 Female, age 91, both hemispheres 45.1
Entorhinal gyrus
nTPM: 55.1
2117 Female, age 91, right hemisphere 71.8
2764 Male, age 80, right hemisphere 60.3
1787 Male, age 76, left hemisphere 50.8
1938 Female, age 85, left hemisphere 50.2
2686 Male, age 75, right hemisphere 49.3
2613 Female, age 94, left hemisphere 48.4
Hippocampus, CA1
nTPM: 48.5
2527 Male, age 74, both hemispheres 50.4
2082 Female, age 91, right hemisphere 49.1
1873 Female, age 85, both hemispheres 49.0
2749 Male, age 80, left hemisphere 48.5
2045 Male, age 76, both hemispheres 45.6
Hippocampus, CA2
nTPM: 54.4
1963 Male, age 80, left hemisphere 63.2
2437 Female, age 94, left hemisphere 56.8
2249 Male, age 74, both hemispheres 56.4
2113 Female, age 91, right hemisphere 52.7
1940 Female, age 85, left hemisphere 50.3
1892 Male, age 76, both hemispheres 46.7
Hippocampus, CA3
nTPM: 49.1
1891 Female, age 85, both hemispheres 60.7
1867 Male, age 76, both hemispheres 54.2
2436 Male, age 74, both hemispheres 48.4
2620 Female, age 94, left hemisphere 44.4
2137 Male, age 80, left hemisphere 43.7
2861 Female, age 67, both hemispheres 43.3
Parahippocampal cortex
nTPM: 50.0
2532 Female, age 72, left hemisphere 58.1
2692 Male, age 74, both hemispheres 58.1
2018 Male, age 76, both hemispheres 54.0
1990 Female, age 91, right hemisphere 51.5
2245 Female, age 91, both hemispheres 49.0
1850 Male, age 80, both hemispheres 48.7
1933 Female, age 85, both hemispheres 48.1
2693 Female, age 94, both hemispheres 45.8
2250 Female, age 67, right hemisphere 44.7
2622 Female, age 67, right hemisphere 41.7
Perirhinal gyrus
nTPM: 44.9
2848 Male, age 76, right hemisphere 47.5
2521 Female, age 94, right hemisphere 46.5
1794 Male, age 80, right hemisphere 45.3
1847 Female, age 91, left hemisphere 43.3
1841 Female, age 85, right hemisphere 41.9
Subiculum
nTPM: 62.3
2042 Male, age 76, both hemispheres 77.2
1901 Male, age 80, both hemispheres 66.8
2438 Female, age 94, left hemisphere 60.7
1977 Female, age 85, both hemispheres 58.5
2619 Male, age 74, both hemispheres 55.7
2729 Female, age 91, right hemisphere 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.3
Samples: 197

Max nTPM: 235.0
Min nTPM: 12.5
Std nTPM: 34.2
Median nTPM: 54.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 235.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 171.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 160.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 146.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 136.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 136.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 135.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 134.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 131.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 130.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 130.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.9
FF:10153-102I9 76 years, female 77.4
FF:10169-103B7 60 years, female 54.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 15.0
Min nTPM: 6.9
Sample A Female 15.0
Sample B Female 9.5
Sample C Male 14.0
Sample D Male 6.9
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 9.5
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 8.7
Sample C Male 9.5
Sample D Male 6.7
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.0
Sample A Female 12.7
Sample B Female 8.0
Sample C Male 9.0
Sample D Male 8.3
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.2
Sample A Female 12.8
Sample B Female 9.2
Sample C Male 11.6
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 44.2
Min nTPM: 33.8
Sample A Male 44.2
Sample B Male 35.6
Sample C Female 42.8
Sample D Female 33.8
Hippocampal formation
nTPM: 56.0
Samples: 4

Max nTPM: 74.9
Min nTPM: 44.5
Sample A Male 44.5
Sample B Male 46.7
Sample C Female 74.9
Sample D Female 57.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68341597 Antisense, RP_041207_01_G12, Mouse strain C57BL/6J (56 days, male) 2.6

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