HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:133.0 nTPM
HPA:133.0 nTPM
GTEx:144.5 nTPM
FANTOM5:548.7 Scaled Tags Per Million
Pig:192.1 nTPM
Mouse:1020.1 nTPM
Allen mouse:29.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044249Antibody CAB002745
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.5
1898 Male, age 80, left hemisphere 63.3
1855 Male, age 76, left hemisphere 9.4
2621 Female, age 67, right hemisphere 6.4
1911 Female, age 85, right hemisphere 2.1
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 20.1
1927 Female, age 91, both hemispheres 58.9
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 20.6
2531 Female, age 67, both hemispheres 17.2
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 62.9
2764 Male, age 80, right hemisphere 112.4
2613 Female, age 94, left hemisphere 98.0
1938 Female, age 85, left hemisphere 92.9
1787 Male, age 76, left hemisphere 68.6
2686 Male, age 75, right hemisphere 5.4
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 48.3
2749 Male, age 80, left hemisphere 154.3
2045 Male, age 76, both hemispheres 45.7
1873 Female, age 85, both hemispheres 26.2
2527 Male, age 74, both hemispheres 8.0
2082 Female, age 91, right hemisphere 7.3
Hippocampus, CA2
nTPM: 26.9
1892 Male, age 76, both hemispheres 78.2
1963 Male, age 80, left hemisphere 36.6
1940 Female, age 85, left hemisphere 19.2
2249 Male, age 74, both hemispheres 13.7
2437 Female, age 94, left hemisphere 13.6
2113 Female, age 91, right hemisphere 0.0
Hippocampus, CA3
nTPM: 45.7
2137 Male, age 80, left hemisphere 125.9
1867 Male, age 76, both hemispheres 60.2
2620 Female, age 94, left hemisphere 58.8
1891 Female, age 85, both hemispheres 29.4
2436 Male, age 74, both hemispheres 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 61.4
1850 Male, age 80, both hemispheres 136.9
2693 Female, age 94, both hemispheres 92.6
1990 Female, age 91, right hemisphere 91.3
1933 Female, age 85, both hemispheres 72.0
2245 Female, age 91, both hemispheres 56.9
2532 Female, age 72, left hemisphere 56.4
2018 Male, age 76, both hemispheres 54.5
2250 Female, age 67, right hemisphere 38.4
2622 Female, age 67, right hemisphere 14.8
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 133.0
1847 Female, age 91, left hemisphere 194.9
1794 Male, age 80, right hemisphere 156.2
1841 Female, age 85, right hemisphere 124.8
2521 Female, age 94, right hemisphere 105.0
2848 Male, age 76, right hemisphere 84.1
Subiculum
nTPM: 34.9
1977 Female, age 85, both hemispheres 89.4
1901 Male, age 80, both hemispheres 73.8
2438 Female, age 94, left hemisphere 29.9
2042 Male, age 76, both hemispheres 16.5
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 144.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 144.5
Samples: 197

Max nTPM: 579.2
Min nTPM: 13.9
Std nTPM: 119.1
Median nTPM: 98.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 579.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 558.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 500.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 473.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 444.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 435.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 434.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 431.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 423.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 421.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 409.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 548.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 548.7
FF:10169-103B7 60 years, female 695.8
FF:10153-102I9 76 years, female 401.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 192.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 163.0
Samples: 4

Max nTPM: 170.6
Min nTPM: 154.8
Sample A Female 161.5
Sample B Female 165.0
Sample C Male 170.6
Sample D Male 154.8
Entorhinal cortex
nTPM: 180.9
Samples: 4

Max nTPM: 198.6
Min nTPM: 158.2
Sample A Female 176.3
Sample B Female 198.6
Sample C Male 190.6
Sample D Male 158.2
Subiculum
nTPM: 192.1
Samples: 4

Max nTPM: 234.1
Min nTPM: 172.6
Sample A Female 234.1
Sample B Female 182.6
Sample C Male 178.9
Sample D Male 172.6
Ventral hippocampus
nTPM: 143.6
Samples: 4

Max nTPM: 176.5
Min nTPM: 127.2
Sample A Female 132.4
Sample B Female 127.2
Sample C Male 176.5
Sample D Male 138.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1020.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1020.1
Samples: 4

Max nTPM: 1221.0
Min nTPM: 904.4
Sample A Male 904.4
Sample B Male 1011.8
Sample C Female 943.1
Sample D Female 1221.0
Hippocampal formation
nTPM: 1003.3
Samples: 4

Max nTPM: 1043.4
Min nTPM: 943.2
Sample A Male 943.2
Sample B Male 1043.4
Sample C Female 1036.6
Sample D Female 990.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 29.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 29.0
68193013 Antisense, RP_040928_01_C01, Mouse strain C57BL/6J (56 days, male) 31.4
70928293 Antisense, RP_050725_02_C08, Mouse strain C57BL/6J (56 days, male) 26.7

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The Human Protein Atlas

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