HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:317.9 nTPM
HPA:317.9 nTPM
GTEx:330.4 nTPM
FANTOM5:543.8 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:247.3 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 317.9
Sample id Sample description nTPM
Hippocampus
nTPM: 313.0
2529 Female, age 94, left hemisphere 341.4
2621 Female, age 67, right hemisphere 315.3
1898 Male, age 80, left hemisphere 312.3
2148 Female, age 91, left hemisphere 305.5
1911 Female, age 85, right hemisphere 303.3
1855 Male, age 76, left hemisphere 300.3
Dentate gyrus
nTPM: 310.2
2246 Female, age 85, both hemispheres 329.7
2530 Female, age 94, left hemisphere 326.4
2531 Female, age 67, both hemispheres 309.2
2010 Male, age 76, both hemispheres 304.1
2528 Male, age 74, both hemispheres 300.8
1927 Female, age 91, both hemispheres 291.3
Entorhinal gyrus
nTPM: 305.1
1787 Male, age 76, left hemisphere 314.9
1938 Female, age 85, left hemisphere 314.6
2117 Female, age 91, right hemisphere 309.2
2686 Male, age 75, right hemisphere 299.8
2764 Male, age 80, right hemisphere 298.4
2613 Female, age 94, left hemisphere 294.0
Hippocampus, CA1
nTPM: 302.0
2527 Male, age 74, both hemispheres 320.6
2749 Male, age 80, left hemisphere 302.6
1873 Female, age 85, both hemispheres 302.3
2045 Male, age 76, both hemispheres 293.2
2082 Female, age 91, right hemisphere 291.3
Hippocampus, CA2
nTPM: 308.7
2437 Female, age 94, left hemisphere 319.6
2249 Male, age 74, both hemispheres 313.6
1940 Female, age 85, left hemisphere 312.9
1892 Male, age 76, both hemispheres 310.7
2113 Female, age 91, right hemisphere 300.0
1963 Male, age 80, left hemisphere 295.5
Hippocampus, CA3
nTPM: 303.8
2436 Male, age 74, both hemispheres 316.2
1891 Female, age 85, both hemispheres 305.5
1867 Male, age 76, both hemispheres 304.3
2861 Female, age 67, both hemispheres 301.7
2137 Male, age 80, left hemisphere 299.7
2620 Female, age 94, left hemisphere 295.2
Parahippocampal cortex
nTPM: 316.5
2245 Female, age 91, both hemispheres 348.7
2532 Female, age 72, left hemisphere 334.9
2622 Female, age 67, right hemisphere 326.1
1850 Male, age 80, both hemispheres 315.6
2250 Female, age 67, right hemisphere 314.4
2018 Male, age 76, both hemispheres 308.6
2692 Male, age 74, both hemispheres 307.0
1933 Female, age 85, both hemispheres 305.2
1990 Female, age 91, right hemisphere 303.8
2693 Female, age 94, both hemispheres 301.0
Perirhinal gyrus
nTPM: 317.2
2521 Female, age 94, right hemisphere 330.5
1841 Female, age 85, right hemisphere 322.9
1794 Male, age 80, right hemisphere 314.0
2848 Male, age 76, right hemisphere 312.4
1847 Female, age 91, left hemisphere 306.1
Subiculum
nTPM: 317.9
2438 Female, age 94, left hemisphere 375.3
2619 Male, age 74, both hemispheres 314.6
1901 Male, age 80, both hemispheres 314.2
2042 Male, age 76, both hemispheres 306.9
1977 Female, age 85, both hemispheres 305.7
2729 Female, age 91, right hemisphere 290.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 330.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 330.4
Samples: 197

Max nTPM: 1005.2
Min nTPM: 225.0
Std nTPM: 75.6
Median nTPM: 318.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1005.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 510.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 493.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 486.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 477.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 477.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 468.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 462.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 459.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 446.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 445.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 543.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 543.8
FF:10169-103B7 60 years, female 599.5
FF:10153-102I9 76 years, female 488.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 65.3
Min nTPM: 37.2
Sample A Female 65.3
Sample B Female 45.3
Sample C Male 50.6
Sample D Male 37.2
Entorhinal cortex
nTPM: 41.7
Samples: 4

Max nTPM: 48.4
Min nTPM: 36.0
Sample A Female 40.8
Sample B Female 48.4
Sample C Male 41.4
Sample D Male 36.0
Subiculum
nTPM: 43.0
Samples: 4

Max nTPM: 54.8
Min nTPM: 38.8
Sample A Female 54.8
Sample B Female 38.8
Sample C Male 39.2
Sample D Male 39.1
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 52.1
Min nTPM: 39.0
Sample A Female 52.1
Sample B Female 39.0
Sample C Male 41.5
Sample D Male 45.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 247.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.2
Samples: 4

Max nTPM: 226.2
Min nTPM: 181.5
Sample A Male 181.5
Sample B Male 204.7
Sample C Female 226.2
Sample D Female 204.4
Hippocampal formation
nTPM: 247.3
Samples: 4

Max nTPM: 271.5
Min nTPM: 229.2
Sample A Male 271.5
Sample B Male 229.2
Sample C Female 231.5
Sample D Female 256.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
74750021 Antisense, RP_060220_05_E11, Mouse strain C57BL/6J (56 days, male) 7.5
70439183 Antisense, RP_050614_03_D02, Mouse strain C57BL/6J (56 days, male) 5.8

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