HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.8 nTPM
HPA:48.8 nTPM
GTEx:53.4 nTPM
FANTOM5:67.9 Scaled Tags Per Million
Pig:58.2 nTPM
Mouse:199.7 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063133Antibody HPA067561Antibody CAB005231
Glial cells HighMediumHigh
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.8
1898 Male, age 80, left hemisphere 51.5
1855 Male, age 76, left hemisphere 51.2
2621 Female, age 67, right hemisphere 51.1
1911 Female, age 85, right hemisphere 50.7
2529 Female, age 94, left hemisphere 47.9
2148 Female, age 91, left hemisphere 40.5
Dentate gyrus
nTPM: 48.6
2010 Male, age 76, both hemispheres 57.3
2530 Female, age 94, left hemisphere 54.6
1927 Female, age 91, both hemispheres 48.4
2246 Female, age 85, both hemispheres 47.1
2528 Male, age 74, both hemispheres 43.8
2531 Female, age 67, both hemispheres 40.6
Entorhinal gyrus
nTPM: 48.2
1938 Female, age 85, left hemisphere 55.2
1787 Male, age 76, left hemisphere 52.3
2764 Male, age 80, right hemisphere 47.9
2686 Male, age 75, right hemisphere 46.9
2117 Female, age 91, right hemisphere 46.2
2613 Female, age 94, left hemisphere 40.7
Hippocampus, CA1
nTPM: 48.6
2749 Male, age 80, left hemisphere 54.5
2045 Male, age 76, both hemispheres 50.3
2527 Male, age 74, both hemispheres 46.2
1873 Female, age 85, both hemispheres 46.0
2082 Female, age 91, right hemisphere 45.9
Hippocampus, CA2
nTPM: 46.6
1892 Male, age 76, both hemispheres 50.2
2249 Male, age 74, both hemispheres 47.9
1963 Male, age 80, left hemisphere 46.6
2437 Female, age 94, left hemisphere 45.4
2113 Female, age 91, right hemisphere 45.3
1940 Female, age 85, left hemisphere 44.0
Hippocampus, CA3
nTPM: 43.6
1891 Female, age 85, both hemispheres 50.3
2137 Male, age 80, left hemisphere 49.2
1867 Male, age 76, both hemispheres 45.5
2436 Male, age 74, both hemispheres 39.5
2861 Female, age 67, both hemispheres 38.8
2620 Female, age 94, left hemisphere 38.3
Parahippocampal cortex
nTPM: 44.3
2018 Male, age 76, both hemispheres 54.2
1850 Male, age 80, both hemispheres 51.8
1933 Female, age 85, both hemispheres 46.1
1990 Female, age 91, right hemisphere 45.5
2245 Female, age 91, both hemispheres 43.6
2692 Male, age 74, both hemispheres 42.7
2532 Female, age 72, left hemisphere 41.6
2250 Female, age 67, right hemisphere 41.5
2693 Female, age 94, both hemispheres 39.5
2622 Female, age 67, right hemisphere 36.5
Perirhinal gyrus
nTPM: 46.7
1847 Female, age 91, left hemisphere 53.6
2848 Male, age 76, right hemisphere 49.0
1841 Female, age 85, right hemisphere 46.6
1794 Male, age 80, right hemisphere 46.2
2521 Female, age 94, right hemisphere 38.2
Subiculum
nTPM: 47.0
2042 Male, age 76, both hemispheres 54.5
1901 Male, age 80, both hemispheres 52.4
1977 Female, age 85, both hemispheres 49.8
2438 Female, age 94, left hemisphere 45.8
2729 Female, age 91, right hemisphere 41.1
2619 Male, age 74, both hemispheres 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.4
Samples: 197

Max nTPM: 104.1
Min nTPM: 30.1
Std nTPM: 11.0
Median nTPM: 51.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 104.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 88.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 85.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 84.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 82.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 79.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 77.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 77.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 76.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 76.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 74.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.9
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 63.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.2
Samples: 4

Max nTPM: 72.1
Min nTPM: 49.1
Sample A Female 72.1
Sample B Female 61.0
Sample C Male 50.6
Sample D Male 49.1
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 53.4
Min nTPM: 45.2
Sample A Female 53.4
Sample B Female 51.7
Sample C Male 45.2
Sample D Male 46.7
Subiculum
nTPM: 47.0
Samples: 4

Max nTPM: 62.0
Min nTPM: 38.7
Sample A Female 62.0
Sample B Female 47.3
Sample C Male 38.7
Sample D Male 40.0
Ventral hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 54.2
Min nTPM: 43.0
Sample A Female 49.7
Sample B Female 43.0
Sample C Male 44.6
Sample D Male 54.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 199.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 192.3
Samples: 4

Max nTPM: 209.6
Min nTPM: 178.3
Sample A Male 178.3
Sample B Male 186.3
Sample C Female 209.6
Sample D Female 194.9
Hippocampal formation
nTPM: 199.7
Samples: 4

Max nTPM: 206.6
Min nTPM: 191.5
Sample A Male 195.3
Sample B Male 205.4
Sample C Female 206.6
Sample D Female 191.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
95 Antisense, RP_Baylor_253873, Mouse strain C57BL/6J (56 days, male) 2.6
94 Antisense, RP_Baylor_253873, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

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