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RLBP1
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  • RLBP1
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Mouse brain, Intensity
Thalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
98.059
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:14.9 nTPM
HPA:14.9 nTPM
FANTOM5:0.2 Scaled Tags Per Million
Pig:78.9 nTPM
Mouse:14.8 nTPM
Allen mouse:0.0 Expression energy

THALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

Read more
, antibody HPA042051
Thalamus mean intensity 98.059
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
FRONT BACK
Medial geniculate nucleus 72.806
Parafascicular thalamic nucleus 30.626
Pregeniculate nucleus 78.651
Stria terminalis 62.825
Zona incerta 21.878
Anterodorsal thalamic nucleus 52.380
Reticular thalamic nucleus 66.273
Vental anterior thalamic nucleus 48.689
Medial habenular nucleus 98.059
Laterodorsal thalamic area 62.672
Paraventricular thalamic nucleus 68.513
Central medial thalamic area 64.844
Ventral lateral thalamic area -
Ventral medial thalamic area 84.698
Lateral habenulal nucleus 78.029
Ventral posterior thalamus 54.866
Anterior pretactal nucleus 61.205
Retromammillary nucleus 96.377

THALAMUS - HPA Brain RNA-seq
Max nTPM 14.9
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 13.9
2497 Male, age 66, unknown 14.1
2032 Female, age 42, unknown 13.9
2396 Male, age 61, right hemisphere 13.7
Centromedial thalamic nucleus
nTPM: 14.9
2279 Female, age 85, left hemisphere 15.6
2401 Male, age 76, right hemisphere 14.2
Habenula
nTPM: 14.1
1957 Male, age 80, both hemispheres 14.2
2252 Male, age 62, unknown 14.2
2203 Male, age 61, left hemisphere 14.1
2276 Male, age 66, unknown 14.0
Lateral geniculate body
nTPM: 13.9
2841 Male, age 80, both hemispheres 14.2
2399 Male, age 61, left hemisphere 14.1
2035 Female, age 72, unknown 14.0
2857 Male, age 74, right hemisphere 14.0
2659 Male, age 66, unknown 13.9
1953 Male, age 62, unknown 13.8
2106 Female, age 67, right hemisphere 13.7
2575 Female, age 94, right hemisphere 13.7
Lateral thalamic nuclei
nTPM: 13.8
1903 Male, age 76, left hemisphere 14.1
2661 Female, age 72, unknown 13.9
2573 Female, age 94, left hemisphere 13.8
2765 Female, age 67, both hemispheres 13.8
2577 Male, age 74, both hemispheres 13.6
Medial dorsal thalamic nucleus
nTPM: 14.0
2572 Female, age 94, right hemisphere 14.4
1930 Female, age 42, unknown 14.3
1810 Male, age 48, unknown 14.2
1859 Male, age 76, both hemispheres 14.2
2283 Male, age 80, right hemisphere 14.1
2026 Male, age 62, unknown 14.0
2492 Male, age 75, right hemisphere 14.0
2498 Male, age 66, unknown 14.0
2039 Female, age 72, unknown 13.9
2402 Female, age 67, both hemispheres 13.9
2576 Male, age 74, both hemispheres 13.9
2660 Female, age 72, unknown 13.9
1971 Male, age 61, right hemisphere 13.8
Medial geniculate body
nTPM: 14.1
2049 Male, age 76, both hemispheres 14.3
2650 Female, age 94, left hemisphere 14.2
2657 Male, age 74, right hemisphere 14.2
1811 Female, age 42, unknown 14.1
2207 Male, age 80, right hemisphere 14.0
2217 Female, age 72, unknown 14.0
2571 Male, age 75, right hemisphere 14.0
Nucleus reuniens
nTPM: 14.0
2210 Female, age 85, left hemisphere 14.3
2205 Male, age 80, left hemisphere 14.0
2212 Female, age 67, left hemisphere 13.8
Nucleus rhomboideus
nTPM: 14.2
2280 Female, age 85, left hemisphere 14.4
2213 Female, age 67, left hemisphere 14.2
2206 Male, age 80, both hemispheres 14.0
Posterior thalamic nucleus
nTPM: 14.1
2266 Male, age 76, right hemisphere 14.7
2495 Female, age 67, right hemisphere 14.0
2649 Female, age 94, both hemispheres 13.9
2655 Male, age 74, right hemisphere 13.9
Pulvinar
nTPM: 14.0
2214 Male, age 76, right hemisphere 14.4
2582 Female, age 72, unknown 14.1
1899 Female, age 42, unknown 14.0
1932 Male, age 80, right hemisphere 14.0
2398 Male, age 61, left hemisphere 14.0
2499 Male, age 66, unknown 14.0
1929 Male, age 48, unknown 13.9
2496 Female, age 67, right hemisphere 13.9
2724 Male, age 74, right hemisphere 13.9
1972 Male, age 62, unknown 13.8
Subthalamic nucleus
nTPM: 13.9
2282 Male, age 61, both hemispheres 14.2
2124 Male, age 62, unknown 14.0
2216 Male, age 48, unknown 13.9
2406 Female, age 72, unknown 13.9
2779 Female, age 42, unknown 13.9
2056 Female, age 72, unknown 13.8
2275 Male, age 66, unknown 13.8
2658 Male, age 74, both hemispheres 13.6
Ventral posterolateral thalamic nucleus
nTPM: 13.9
2197 Male, age 80, both hemispheres 14.1
2581 Female, age 72, unknown 14.0
2740 Male, age 76, right hemisphere 14.0
2570 Male, age 75, right hemisphere 13.8
2397 Male, age 61, right hemisphere 13.6
2578 Male, age 74, both hemispheres 13.6
Ventral posteromedial thalamic nucleus
nTPM: 14.1
2127 Male, age 76, right hemisphere 14.3
2758 Male, age 80, both hemispheres 14.3
2281 Male, age 75, right hemisphere 14.2
2202 Male, age 61, left hemisphere 13.9
2653 Male, age 74, both hemispheres 13.6
Ventral thalamic nuclei
nTPM: 14.0
2291 Female, age 72, unknown 14.3
1860 Male, age 76, both hemispheres 14.2
2285 Male, age 62, unknown 14.1
2204 Male, age 80, both hemispheres 14.0
1912 Female, age 42, unknown 13.9
2580 Male, age 66, unknown 13.9
2858 Female, age 72, unknown 13.9
1845 Male, age 48, unknown 13.8
2652 Male, age 74, left hemisphere 13.6
Ventromedial nucleus
nTPM: 14.8
1982 Female, age 72, unknown 14.9
1822 Female, age 42, unknown 14.7
Zona incerta
nTPM: 13.9
2208 Male, age 80, right hemisphere 14.2
2215 Male, age 66, unknown 13.9
2403 Male, age 62, unknown 13.9
2663 Female, age 72, unknown 13.9
2822 Male, age 74, right hemisphere 13.6

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 0.2
FF:10154-103A1 76 years, female 0.2

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 78.9
Pig sample Sample description nTPM
Thalamus
nTPM: 79.0
Samples: 4

Max nTPM: 104.7
Min nTPM: 52.8
Sample A Female 104.7
Sample B Female 53.9
Sample C Male 104.4
Sample D Male 52.8

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 14.8
Mouse sample Sample description nTPM
Thalamus
nTPM: 14.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.8
Sample A Male 13.8
Sample B Male 14.0
Sample C Female 17.8
Sample D Female 13.8

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 0.0
638716 Antisense, RP_040831_02_D04, Mouse strain C57BL/6J (56 days, male) 0.0

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by the Knut & Alice Wallenberg Foundation.