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RPS2
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1482.9 nTPM
HPA:874.3 nTPM
GTEx:1482.9 nTPM
FANTOM5:31.0 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055133
Glandular cells Medium


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 874.3
overview
Male, age 65
Small intestine sample 232
nTPM: 1198.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 778.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 755.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 764.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1482.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1482.9
Samples: 187

Max nTPM: 2688.0
Min nTPM: 714.0
Std nTPM: 429.1
Median nTPM: 1377.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2688.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2639.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2565.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2505.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 2459.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2357.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2302.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2260.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2231.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2207.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2205.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2195.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2194.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2162.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2158.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2146.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2130.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2116.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2105.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2105.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2079.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2060.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2058.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2053.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2052.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2029.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 2025.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1994.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1987.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1956.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1944.1
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1937.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1922.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1910.0
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1901.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1881.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1878.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1868.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1864.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1836.5
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1836.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1816.2
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1808.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1805.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1778.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1766.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1765.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1749.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1747.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1739.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1735.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1735.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1734.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1725.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1711.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1704.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1690.4
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1683.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1681.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1679.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1656.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1655.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1653.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1648.7
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1643.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1634.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1634.8
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1626.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1610.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1607.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1604.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1599.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1590.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1578.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1574.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1574.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1558.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1556.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1540.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1536.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1516.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1507.8
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1505.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1490.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1470.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1455.7
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1444.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1439.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1434.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1423.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1421.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1421.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1395.5
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1377.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1374.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1369.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1359.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1358.2
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1357.1
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1354.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1353.7
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1353.6
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1352.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1348.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1346.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1343.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1336.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1335.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1330.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1321.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1316.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1305.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1301.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1296.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1295.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1293.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1285.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1281.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1269.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1269.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1268.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1267.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1241.9
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1237.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1233.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1231.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1230.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1227.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1225.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1220.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1215.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1214.5
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1191.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1181.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1177.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1176.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1175.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1169.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1169.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1164.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1160.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1160.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1136.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1110.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1109.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1102.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1094.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1088.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1085.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1083.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1077.1
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1072.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1061.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1058.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1056.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 1056.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1052.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1051.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1049.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1040.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1039.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1032.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1018.5
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1003.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1000.7
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 983.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 982.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 964.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 955.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 952.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 951.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 951.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 941.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 937.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 934.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 920.5
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 911.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 892.6
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 885.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 880.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 871.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 842.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 777.7
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 756.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 752.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 751.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 714.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 31.0
FF:10024-101D6 15,40,85 years, mixed 31.0

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