HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:148.5 nTPM
HPA:148.5 nTPM
GTEx:184.9 nTPM
FANTOM5:237.6 Scaled Tags Per Million
Pig:112.9 nTPM
Mouse:259.9 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073189
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 148.5
Sample id Sample description nTPM
Hippocampus
nTPM: 144.9
1898 Male, age 80, left hemisphere 154.6
2621 Female, age 67, right hemisphere 149.7
2529 Female, age 94, left hemisphere 144.7
1855 Male, age 76, left hemisphere 144.0
1911 Female, age 85, right hemisphere 140.4
2148 Female, age 91, left hemisphere 136.1
Dentate gyrus
nTPM: 141.6
2530 Female, age 94, left hemisphere 147.4
1927 Female, age 91, both hemispheres 144.8
2246 Female, age 85, both hemispheres 144.7
2010 Male, age 76, both hemispheres 141.6
2531 Female, age 67, both hemispheres 139.9
2528 Male, age 74, both hemispheres 131.1
Entorhinal gyrus
nTPM: 138.3
2764 Male, age 80, right hemisphere 146.3
1938 Female, age 85, left hemisphere 141.9
1787 Male, age 76, left hemisphere 139.9
2117 Female, age 91, right hemisphere 138.1
2613 Female, age 94, left hemisphere 133.3
2686 Male, age 75, right hemisphere 130.4
Hippocampus, CA1
nTPM: 148.5
2749 Male, age 80, left hemisphere 172.0
2527 Male, age 74, both hemispheres 152.4
1873 Female, age 85, both hemispheres 147.5
2045 Male, age 76, both hemispheres 136.7
2082 Female, age 91, right hemisphere 134.1
Hippocampus, CA2
nTPM: 144.3
1892 Male, age 76, both hemispheres 152.3
2437 Female, age 94, left hemisphere 148.4
1963 Male, age 80, left hemisphere 147.3
2249 Male, age 74, both hemispheres 145.9
1940 Female, age 85, left hemisphere 137.2
2113 Female, age 91, right hemisphere 134.4
Hippocampus, CA3
nTPM: 144.9
2137 Male, age 80, left hemisphere 155.9
2436 Male, age 74, both hemispheres 149.1
1867 Male, age 76, both hemispheres 145.7
2620 Female, age 94, left hemisphere 142.0
1891 Female, age 85, both hemispheres 140.2
2861 Female, age 67, both hemispheres 136.8
Parahippocampal cortex
nTPM: 140.1
2245 Female, age 91, both hemispheres 148.4
2250 Female, age 67, right hemisphere 146.3
1850 Male, age 80, both hemispheres 146.0
2532 Female, age 72, left hemisphere 143.8
1990 Female, age 91, right hemisphere 141.7
1933 Female, age 85, both hemispheres 139.6
2692 Male, age 74, both hemispheres 135.1
2018 Male, age 76, both hemispheres 133.7
2622 Female, age 67, right hemisphere 133.4
2693 Female, age 94, both hemispheres 132.6
Perirhinal gyrus
nTPM: 145.6
1847 Female, age 91, left hemisphere 153.6
1794 Male, age 80, right hemisphere 153.4
1841 Female, age 85, right hemisphere 145.2
2521 Female, age 94, right hemisphere 139.1
2848 Male, age 76, right hemisphere 136.6
Subiculum
nTPM: 143.6
2438 Female, age 94, left hemisphere 153.5
1901 Male, age 80, both hemispheres 149.3
1977 Female, age 85, both hemispheres 144.3
2619 Male, age 74, both hemispheres 143.3
2042 Male, age 76, both hemispheres 140.8
2729 Female, age 91, right hemisphere 130.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.9
Samples: 197

Max nTPM: 411.3
Min nTPM: 74.1
Std nTPM: 47.5
Median nTPM: 179.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 411.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 331.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 317.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 315.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 307.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 301.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 296.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 294.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 283.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 274.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 271.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.6
FF:10169-103B7 60 years, female 313.9
FF:10153-102I9 76 years, female 161.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 112.9
Samples: 4

Max nTPM: 149.6
Min nTPM: 85.6
Sample A Female 149.6
Sample B Female 103.3
Sample C Male 112.9
Sample D Male 85.6
Entorhinal cortex
nTPM: 93.1
Samples: 4

Max nTPM: 109.5
Min nTPM: 75.7
Sample A Female 99.9
Sample B Female 109.5
Sample C Male 87.2
Sample D Male 75.7
Subiculum
nTPM: 89.1
Samples: 4

Max nTPM: 122.5
Min nTPM: 74.3
Sample A Female 122.5
Sample B Female 80.6
Sample C Male 74.3
Sample D Male 78.9
Ventral hippocampus
nTPM: 102.5
Samples: 4

Max nTPM: 112.9
Min nTPM: 75.6
Sample A Female 111.7
Sample B Female 75.6
Sample C Male 112.9
Sample D Male 109.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 259.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 235.3
Samples: 4

Max nTPM: 247.6
Min nTPM: 219.5
Sample A Male 229.0
Sample B Male 245.1
Sample C Female 247.6
Sample D Female 219.5
Hippocampal formation
nTPM: 259.9
Samples: 4

Max nTPM: 279.8
Min nTPM: 237.8
Sample A Male 276.9
Sample B Male 245.1
Sample C Female 237.8
Sample D Female 279.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
71608213 Antisense, RP_050927_01_B09, Mouse strain C57BL/6J (56 days, male) 19.3

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