HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.5 nTPM
HPA:22.5 nTPM
GTEx:16.5 nTPM
FANTOM5:34.4 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:33.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056415
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
1855 Male, age 76, left hemisphere 21.1
1898 Male, age 80, left hemisphere 20.7
2148 Female, age 91, left hemisphere 20.4
2621 Female, age 67, right hemisphere 20.4
2529 Female, age 94, left hemisphere 19.9
1911 Female, age 85, right hemisphere 19.0
Dentate gyrus
nTPM: 20.1
2531 Female, age 67, both hemispheres 21.0
2528 Male, age 74, both hemispheres 20.5
2010 Male, age 76, both hemispheres 20.2
1927 Female, age 91, both hemispheres 20.0
2246 Female, age 85, both hemispheres 20.0
2530 Female, age 94, left hemisphere 18.9
Entorhinal gyrus
nTPM: 22.2
2764 Male, age 80, right hemisphere 23.4
2613 Female, age 94, left hemisphere 22.5
2686 Male, age 75, right hemisphere 22.3
1787 Male, age 76, left hemisphere 22.1
1938 Female, age 85, left hemisphere 22.1
2117 Female, age 91, right hemisphere 20.6
Hippocampus, CA1
nTPM: 20.2
2045 Male, age 76, both hemispheres 20.4
2082 Female, age 91, right hemisphere 20.4
2527 Male, age 74, both hemispheres 20.2
2749 Male, age 80, left hemisphere 20.2
1873 Female, age 85, both hemispheres 20.0
Hippocampus, CA2
nTPM: 20.0
2249 Male, age 74, both hemispheres 20.5
2113 Female, age 91, right hemisphere 20.3
1892 Male, age 76, both hemispheres 20.1
2437 Female, age 94, left hemisphere 20.1
1940 Female, age 85, left hemisphere 19.8
1963 Male, age 80, left hemisphere 19.2
Hippocampus, CA3
nTPM: 21.0
2620 Female, age 94, left hemisphere 23.7
2861 Female, age 67, both hemispheres 22.5
2436 Male, age 74, both hemispheres 20.4
1891 Female, age 85, both hemispheres 20.1
2137 Male, age 80, left hemisphere 19.8
1867 Male, age 76, both hemispheres 19.6
Parahippocampal cortex
nTPM: 21.5
2622 Female, age 67, right hemisphere 23.3
1850 Male, age 80, both hemispheres 22.3
2693 Female, age 94, both hemispheres 22.3
2532 Female, age 72, left hemisphere 21.9
1990 Female, age 91, right hemisphere 21.8
2692 Male, age 74, both hemispheres 21.6
1933 Female, age 85, both hemispheres 20.8
2245 Female, age 91, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.8
2018 Male, age 76, both hemispheres 19.6
Perirhinal gyrus
nTPM: 22.5
1794 Male, age 80, right hemisphere 24.0
1847 Female, age 91, left hemisphere 22.7
1841 Female, age 85, right hemisphere 22.3
2521 Female, age 94, right hemisphere 21.7
2848 Male, age 76, right hemisphere 21.6
Subiculum
nTPM: 20.2
2619 Male, age 74, both hemispheres 21.3
1977 Female, age 85, both hemispheres 21.2
2729 Female, age 91, right hemisphere 20.3
1901 Male, age 80, both hemispheres 20.1
2438 Female, age 94, left hemisphere 19.5
2042 Male, age 76, both hemispheres 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 28.3
Min nTPM: 7.8
Std nTPM: 3.7
Median nTPM: 16.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 28.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 26.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 25.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 25.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 24.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 24.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 24.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 24.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.4
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.7
Sample A Female 7.8
Sample B Female 6.7
Sample C Male 5.7
Sample D Male 6.4
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.7
Sample A Female 7.1
Sample B Female 7.2
Sample C Male 7.6
Sample D Male 6.7
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.8
Sample A Female 7.0
Sample B Female 5.3
Sample C Male 5.6
Sample D Male 4.8
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.3
Sample A Female 6.7
Sample B Female 5.3
Sample C Male 8.4
Sample D Male 7.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 35.7
Min nTPM: 30.6
Sample A Male 35.7
Sample B Male 34.1
Sample C Female 30.6
Sample D Female 31.7
Hippocampal formation
nTPM: 31.1
Samples: 4

Max nTPM: 32.3
Min nTPM: 29.7
Sample A Male 32.3
Sample B Male 29.7
Sample C Female 30.7
Sample D Female 31.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71487046 Antisense, RP_050913_01_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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