HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:65.3 nTPM
HPA:65.3 nTPM
GTEx:68.7 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:62.2 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.3
Sample id Sample description nTPM
Hippocampus
nTPM: 65.3
1855 Male, age 76, left hemisphere 69.0
2529 Female, age 94, left hemisphere 67.1
2621 Female, age 67, right hemisphere 66.4
2148 Female, age 91, left hemisphere 64.6
1898 Male, age 80, left hemisphere 64.0
1911 Female, age 85, right hemisphere 60.8
Dentate gyrus
nTPM: 63.9
2530 Female, age 94, left hemisphere 72.3
2010 Male, age 76, both hemispheres 65.7
2246 Female, age 85, both hemispheres 64.5
2528 Male, age 74, both hemispheres 63.3
2531 Female, age 67, both hemispheres 58.7
1927 Female, age 91, both hemispheres 58.6
Entorhinal gyrus
nTPM: 61.8
2117 Female, age 91, right hemisphere 66.8
2613 Female, age 94, left hemisphere 62.3
2764 Male, age 80, right hemisphere 62.2
1787 Male, age 76, left hemisphere 61.4
1938 Female, age 85, left hemisphere 60.6
2686 Male, age 75, right hemisphere 57.5
Hippocampus, CA1
nTPM: 61.9
2527 Male, age 74, both hemispheres 65.4
1873 Female, age 85, both hemispheres 62.5
2749 Male, age 80, left hemisphere 61.6
2045 Male, age 76, both hemispheres 60.0
2082 Female, age 91, right hemisphere 60.0
Hippocampus, CA2
nTPM: 63.3
2437 Female, age 94, left hemisphere 66.8
2249 Male, age 74, both hemispheres 66.7
1892 Male, age 76, both hemispheres 64.0
1940 Female, age 85, left hemisphere 61.1
1963 Male, age 80, left hemisphere 60.9
2113 Female, age 91, right hemisphere 60.1
Hippocampus, CA3
nTPM: 62.3
2436 Male, age 74, both hemispheres 72.5
2620 Female, age 94, left hemisphere 61.9
1867 Male, age 76, both hemispheres 61.7
2861 Female, age 67, both hemispheres 60.7
1891 Female, age 85, both hemispheres 58.9
2137 Male, age 80, left hemisphere 58.3
Parahippocampal cortex
nTPM: 60.9
2245 Female, age 91, both hemispheres 63.9
2250 Female, age 67, right hemisphere 63.1
2692 Male, age 74, both hemispheres 62.9
2622 Female, age 67, right hemisphere 61.8
1933 Female, age 85, both hemispheres 61.4
2532 Female, age 72, left hemisphere 60.9
1850 Male, age 80, both hemispheres 59.0
2018 Male, age 76, both hemispheres 58.9
1990 Female, age 91, right hemisphere 58.3
2693 Female, age 94, both hemispheres 58.3
Perirhinal gyrus
nTPM: 59.2
1794 Male, age 80, right hemisphere 61.3
2521 Female, age 94, right hemisphere 60.6
1847 Female, age 91, left hemisphere 58.4
2848 Male, age 76, right hemisphere 58.3
1841 Female, age 85, right hemisphere 57.1
Subiculum
nTPM: 62.0
2619 Male, age 74, both hemispheres 66.7
2438 Female, age 94, left hemisphere 63.4
2729 Female, age 91, right hemisphere 61.6
1901 Male, age 80, both hemispheres 60.5
1977 Female, age 85, both hemispheres 60.5
2042 Male, age 76, both hemispheres 59.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.7
Samples: 197

Max nTPM: 110.7
Min nTPM: 28.5
Std nTPM: 16.9
Median nTPM: 67.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 110.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 110.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 107.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 103.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 101.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 101.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 100.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 99.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 95.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 95.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10153-102I9 76 years, female 48.5
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 29.0
Min nTPM: 14.5
Sample A Female 29.0
Sample B Female 20.5
Sample C Male 20.3
Sample D Male 14.5
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.0
Sample A Female 17.0
Sample B Female 14.3
Sample C Male 16.4
Sample D Male 12.0
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.4
Sample A Female 19.4
Sample B Female 14.4
Sample C Male 17.6
Sample D Male 15.6
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 28.2
Min nTPM: 13.0
Sample A Female 23.5
Sample B Female 13.0
Sample C Male 28.2
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 63.4
Min nTPM: 60.0
Sample A Male 60.0
Sample B Male 62.4
Sample C Female 63.2
Sample D Female 63.4
Hippocampal formation
nTPM: 55.0
Samples: 4

Max nTPM: 60.7
Min nTPM: 49.9
Sample A Male 60.7
Sample B Male 49.9
Sample C Female 52.5
Sample D Female 57.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69672689 Antisense, RP_050428_04_C10, Mouse strain C57BL/6J (56 days, male) 3.1

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