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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:90.5 nTPM
FANTOM5:341.8 Scaled Tags Per Million
Pig:162.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA059143Antibody CAB010389Antibody CAB011571Antibody CAB017155
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells MediumMediumNot detectedMedium









CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 90.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 90.5
Samples: 246

Max nTPM: 211.1
Min nTPM: 41.2
Std nTPM: 24.8
Median nTPM: 87.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 211.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 192.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 160.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 160.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 155.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 150.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 147.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 141.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 138.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 136.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 134.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 133.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 132.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 130.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 127.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 126.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 126.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 126.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 124.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 124.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 121.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 120.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 119.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 119.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 119.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 117.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 116.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 115.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 115.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 115.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 115.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 114.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 112.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 112.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 111.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 111.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 110.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 110.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 109.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 109.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 108.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 108.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 107.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 107.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 107.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 106.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 106.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 106.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 106.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 105.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 105.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 104.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 104.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 102.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 102.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 102.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 102.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 102.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 102.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 101.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 101.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 100.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 100.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 100.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 99.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 98.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 98.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 97.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 97.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 97.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 97.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 96.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 95.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 95.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 95.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 95.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 94.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 94.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 94.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 94.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 94.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 93.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 93.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 93.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 93.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 93.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 93.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 92.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 92.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 91.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 91.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 91.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 90.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 89.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 89.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 89.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 88.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 88.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 87.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 87.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 87.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 86.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 86.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 86.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 85.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 85.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 85.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 84.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 84.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 84.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 84.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 83.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 83.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 82.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 82.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 82.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 82.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 82.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 82.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 82.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 82.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 82.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 81.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 81.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 80.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 80.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 80.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 80.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 80.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 80.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 79.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 79.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 79.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 79.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 78.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 77.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 77.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 74.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 74.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 74.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 74.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 74.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 73.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 72.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 72.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 72.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 71.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 71.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 70.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 70.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 70.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 69.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 69.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 69.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 69.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 69.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 69.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 68.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 68.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 66.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 65.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 65.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 64.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 64.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 63.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 62.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 62.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 61.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 61.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 61.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 60.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 59.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 58.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 57.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 50.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 49.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 46.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 45.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 41.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 341.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 341.8
FF:10164-103B2 76 years, female 341.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.4
Pig sample Sample description nTPM
Caudate
nTPM: 162.4
Samples: 4

Max nTPM: 175.5
Min nTPM: 156.7
Sample A Female 157.3
Sample B Female 156.7
Sample C Male 175.5
Sample D Male 159.9

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