HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:19.3 nTPM
FANTOM5:47.5 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:39.1 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042377
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
2529 Female, age 94, left hemisphere 20.3
2621 Female, age 67, right hemisphere 19.5
1898 Male, age 80, left hemisphere 18.4
2148 Female, age 91, left hemisphere 17.9
1911 Female, age 85, right hemisphere 17.5
1855 Male, age 76, left hemisphere 17.0
Dentate gyrus
nTPM: 17.5
2528 Male, age 74, both hemispheres 18.9
2010 Male, age 76, both hemispheres 18.8
2530 Female, age 94, left hemisphere 18.4
2246 Female, age 85, both hemispheres 17.6
1927 Female, age 91, both hemispheres 16.2
2531 Female, age 67, both hemispheres 15.2
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 25.0
1787 Male, age 76, left hemisphere 19.5
1938 Female, age 85, left hemisphere 19.3
2764 Male, age 80, right hemisphere 18.7
2613 Female, age 94, left hemisphere 17.1
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 18.2
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 17.7
2045 Male, age 76, both hemispheres 17.6
1873 Female, age 85, both hemispheres 16.5
2749 Male, age 80, left hemisphere 16.3
Hippocampus, CA2
nTPM: 19.3
2249 Male, age 74, both hemispheres 26.2
1963 Male, age 80, left hemisphere 19.7
1892 Male, age 76, both hemispheres 18.5
2113 Female, age 91, right hemisphere 17.8
2437 Female, age 94, left hemisphere 17.4
1940 Female, age 85, left hemisphere 16.0
Hippocampus, CA3
nTPM: 18.8
2436 Male, age 74, both hemispheres 26.1
2620 Female, age 94, left hemisphere 20.8
1891 Female, age 85, both hemispheres 18.9
1867 Male, age 76, both hemispheres 17.4
2137 Male, age 80, left hemisphere 14.7
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 18.0
2250 Female, age 67, right hemisphere 19.6
1990 Female, age 91, right hemisphere 19.4
1850 Male, age 80, both hemispheres 19.3
2692 Male, age 74, both hemispheres 19.2
2532 Female, age 72, left hemisphere 18.5
2245 Female, age 91, both hemispheres 17.3
2018 Male, age 76, both hemispheres 17.2
1933 Female, age 85, both hemispheres 17.1
2622 Female, age 67, right hemisphere 16.6
2693 Female, age 94, both hemispheres 16.2
Perirhinal gyrus
nTPM: 18.8
2521 Female, age 94, right hemisphere 19.7
2848 Male, age 76, right hemisphere 19.2
1794 Male, age 80, right hemisphere 19.1
1841 Female, age 85, right hemisphere 18.0
1847 Female, age 91, left hemisphere 18.0
Subiculum
nTPM: 20.0
2619 Male, age 74, both hemispheres 22.0
2438 Female, age 94, left hemisphere 20.7
1977 Female, age 85, both hemispheres 20.3
2729 Female, age 91, right hemisphere 19.4
2042 Male, age 76, both hemispheres 18.9
1901 Male, age 80, both hemispheres 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 49.1
Min nTPM: 8.6
Std nTPM: 5.2
Median nTPM: 18.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 49.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 30.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 29.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 29.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 28.9
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 28.8
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 28.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.5
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 14.9
Sample A Female 22.7
Sample B Female 18.3
Sample C Male 20.7
Sample D Male 14.9
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.7
Min nTPM: 15.9
Sample A Female 19.7
Sample B Female 18.0
Sample C Male 18.5
Sample D Male 15.9
Subiculum
nTPM: 18.6
Samples: 4

Max nTPM: 21.5
Min nTPM: 17.5
Sample A Female 21.5
Sample B Female 17.5
Sample C Male 17.7
Sample D Male 17.6
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.9
Sample A Female 20.9
Sample B Female 14.9
Sample C Male 19.1
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.6
Samples: 4

Max nTPM: 39.6
Min nTPM: 26.0
Sample A Male 30.7
Sample B Male 26.0
Sample C Female 34.1
Sample D Female 39.6
Hippocampal formation
nTPM: 39.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 34.4
Sample A Male 37.5
Sample B Male 45.2
Sample C Female 39.2
Sample D Female 34.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70474761 Antisense, RP_050614_04_H10, Mouse strain C57BL/6J (56 days, male) 2.5
73930852 Antisense, RP_051214_04_D05, Mouse strain C57BL/6J (56 days, male) 1.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.