HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:77.3 nTPM
HPA:77.3 nTPM
GTEx:77.9 nTPM
FANTOM5:109.1 Scaled Tags Per Million
Pig:94.2 nTPM
Mouse:231.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040959Antibody HPA043401
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.7
2529 Female, age 94, left hemisphere 83.2
2621 Female, age 67, right hemisphere 71.3
1898 Male, age 80, left hemisphere 68.7
1911 Female, age 85, right hemisphere 66.0
1855 Male, age 76, left hemisphere 58.9
2148 Female, age 91, left hemisphere 58.0
Dentate gyrus
nTPM: 64.4
2530 Female, age 94, left hemisphere 76.1
2010 Male, age 76, both hemispheres 64.2
2246 Female, age 85, both hemispheres 64.0
2528 Male, age 74, both hemispheres 62.9
2531 Female, age 67, both hemispheres 61.8
1927 Female, age 91, both hemispheres 57.3
Entorhinal gyrus
nTPM: 74.7
2117 Female, age 91, right hemisphere 80.7
2686 Male, age 75, right hemisphere 79.8
2764 Male, age 80, right hemisphere 77.6
1787 Male, age 76, left hemisphere 76.2
1938 Female, age 85, left hemisphere 69.4
2613 Female, age 94, left hemisphere 64.3
Hippocampus, CA1
nTPM: 62.9
2527 Male, age 74, both hemispheres 72.2
2749 Male, age 80, left hemisphere 68.5
1873 Female, age 85, both hemispheres 66.0
2082 Female, age 91, right hemisphere 58.3
2045 Male, age 76, both hemispheres 49.3
Hippocampus, CA2
nTPM: 69.8
2437 Female, age 94, left hemisphere 73.8
2249 Male, age 74, both hemispheres 73.3
1963 Male, age 80, left hemisphere 72.4
1892 Male, age 76, both hemispheres 68.9
1940 Female, age 85, left hemisphere 67.9
2113 Female, age 91, right hemisphere 62.6
Hippocampus, CA3
nTPM: 66.3
2436 Male, age 74, both hemispheres 73.7
1891 Female, age 85, both hemispheres 71.9
2620 Female, age 94, left hemisphere 68.9
2137 Male, age 80, left hemisphere 66.4
1867 Male, age 76, both hemispheres 65.4
2861 Female, age 67, both hemispheres 51.6
Parahippocampal cortex
nTPM: 73.0
2532 Female, age 72, left hemisphere 84.9
1850 Male, age 80, both hemispheres 82.4
2692 Male, age 74, both hemispheres 76.8
2693 Female, age 94, both hemispheres 73.1
1990 Female, age 91, right hemisphere 73.0
2245 Female, age 91, both hemispheres 72.2
1933 Female, age 85, both hemispheres 71.2
2250 Female, age 67, right hemisphere 66.6
2018 Male, age 76, both hemispheres 65.9
2622 Female, age 67, right hemisphere 63.8
Perirhinal gyrus
nTPM: 77.3
2848 Male, age 76, right hemisphere 85.3
1841 Female, age 85, right hemisphere 82.4
1794 Male, age 80, right hemisphere 79.6
2521 Female, age 94, right hemisphere 72.9
1847 Female, age 91, left hemisphere 66.6
Subiculum
nTPM: 76.7
2438 Female, age 94, left hemisphere 86.5
1901 Male, age 80, both hemispheres 82.3
2042 Male, age 76, both hemispheres 80.5
2619 Male, age 74, both hemispheres 76.6
1977 Female, age 85, both hemispheres 75.4
2729 Female, age 91, right hemisphere 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.9
Samples: 197

Max nTPM: 188.0
Min nTPM: 21.7
Std nTPM: 27.3
Median nTPM: 71.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 188.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 186.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 158.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 148.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 142.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 139.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 137.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 132.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 131.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 131.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 129.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.1
FF:10153-102I9 76 years, female 125.1
FF:10169-103B7 60 years, female 93.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.4
Samples: 4

Max nTPM: 81.3
Min nTPM: 34.2
Sample A Female 81.3
Sample B Female 54.2
Sample C Male 68.0
Sample D Male 34.2
Entorhinal cortex
nTPM: 94.3
Samples: 4

Max nTPM: 114.3
Min nTPM: 83.6
Sample A Female 92.2
Sample B Female 114.3
Sample C Male 83.6
Sample D Male 86.9
Subiculum
nTPM: 55.3
Samples: 4

Max nTPM: 79.8
Min nTPM: 40.0
Sample A Female 79.8
Sample B Female 53.3
Sample C Male 40.0
Sample D Male 48.2
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 55.9
Min nTPM: 38.0
Sample A Female 55.9
Sample B Female 38.0
Sample C Male 48.8
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 231.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 231.8
Samples: 4

Max nTPM: 306.8
Min nTPM: 183.6
Sample A Male 248.1
Sample B Male 306.8
Sample C Female 188.5
Sample D Female 183.6
Hippocampal formation
nTPM: 115.9
Samples: 4

Max nTPM: 134.5
Min nTPM: 101.7
Sample A Male 134.5
Sample B Male 101.7
Sample C Female 106.6
Sample D Female 120.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763540 Antisense, RP_050921_02_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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