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ARHGDIA
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:186.8 nTPM
FANTOM5:150.9 Scaled Tags Per Million
Pig:85.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021407Antibody CAB010005
Glial cells Not detectedNot detected
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 186.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 186.8
Samples: 246

Max nTPM: 313.9
Min nTPM: 78.6
Std nTPM: 42.0
Median nTPM: 185.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 313.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 305.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 290.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 281.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 278.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 274.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 272.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 271.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 269.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 266.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 265.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 264.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 259.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 258.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 257.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 255.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 253.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 251.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 250.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 248.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 248.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 245.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 244.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 240.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 238.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 238.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 237.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 236.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 234.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 231.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 231.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 230.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 230.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 228.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 228.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 228.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 228.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 227.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 227.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 226.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 226.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 225.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 224.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 223.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 223.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 222.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 221.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 221.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 221.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 220.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 220.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 220.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 220.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 219.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 219.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 218.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 217.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 217.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 216.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 216.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 215.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 215.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 215.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 215.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 215.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 215.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 214.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 209.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 208.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 208.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 208.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 207.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 207.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 206.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 205.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 204.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 203.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 203.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 202.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 201.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 201.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 201.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 200.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 199.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 199.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 199.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 199.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 199.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 198.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 198.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 197.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 197.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 196.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 196.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 196.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 196.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 196.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 196.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 195.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 195.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 195.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 195.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 195.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 194.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 194.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 193.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 193.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 193.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 192.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 192.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 191.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 189.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 189.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 188.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 188.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 188.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 187.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 186.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 185.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 184.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 184.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 182.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 182.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 181.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 181.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 181.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 179.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 179.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 179.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 179.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 179.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 178.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 178.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 177.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 177.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 176.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 176.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 173.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 173.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 173.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 173.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 173.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 172.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 172.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 171.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 170.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 170.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 170.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 167.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 167.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 167.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 167.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 167.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 166.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 166.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 165.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 165.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 165.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 164.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 164.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 164.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 163.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 163.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 161.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 160.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 159.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 159.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 159.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 159.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 157.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 157.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 155.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 155.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 155.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 155.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 155.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 155.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 154.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 154.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 154.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 154.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 153.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 153.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 152.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 151.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 151.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 151.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 151.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 151.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 150.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 149.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 149.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 148.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 146.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 146.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 146.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 145.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 145.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 143.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 143.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 140.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 139.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 139.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 138.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 136.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 132.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 132.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 132.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 130.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 129.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 128.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 128.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 126.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 126.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 126.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 120.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 120.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 119.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 119.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 117.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 115.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 110.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 107.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 106.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 105.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 104.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 94.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 78.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 150.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 150.9
FF:10164-103B2 76 years, female 150.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 85.1
Pig sample Sample description nTPM
Caudate
nTPM: 85.1
Samples: 4

Max nTPM: 102.9
Min nTPM: 65.0
Sample A Female 65.0
Sample B Female 95.4
Sample C Male 102.9
Sample D Male 77.1

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