HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:95.0 nTPM
HPA:95.0 nTPM
GTEx:123.0 nTPM
FANTOM5:139.2 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:9.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.0
Sample id Sample description nTPM
Hippocampus
nTPM: 90.2
1898 Male, age 80, left hemisphere 97.7
1855 Male, age 76, left hemisphere 92.6
2529 Female, age 94, left hemisphere 91.2
1911 Female, age 85, right hemisphere 87.0
2148 Female, age 91, left hemisphere 86.8
2621 Female, age 67, right hemisphere 86.0
Dentate gyrus
nTPM: 91.4
2010 Male, age 76, both hemispheres 97.5
2530 Female, age 94, left hemisphere 96.3
1927 Female, age 91, both hemispheres 93.1
2528 Male, age 74, both hemispheres 89.1
2246 Female, age 85, both hemispheres 87.5
2531 Female, age 67, both hemispheres 85.1
Entorhinal gyrus
nTPM: 88.3
1938 Female, age 85, left hemisphere 95.1
1787 Male, age 76, left hemisphere 90.8
2117 Female, age 91, right hemisphere 88.5
2764 Male, age 80, right hemisphere 86.6
2613 Female, age 94, left hemisphere 86.0
2686 Male, age 75, right hemisphere 82.7
Hippocampus, CA1
nTPM: 95.0
2749 Male, age 80, left hemisphere 107.2
1873 Female, age 85, both hemispheres 96.6
2527 Male, age 74, both hemispheres 93.4
2045 Male, age 76, both hemispheres 89.4
2082 Female, age 91, right hemisphere 88.5
Hippocampus, CA2
nTPM: 92.3
1892 Male, age 76, both hemispheres 98.0
1963 Male, age 80, left hemisphere 97.7
2249 Male, age 74, both hemispheres 97.0
2437 Female, age 94, left hemisphere 88.4
2113 Female, age 91, right hemisphere 86.7
1940 Female, age 85, left hemisphere 86.2
Hippocampus, CA3
nTPM: 91.4
2137 Male, age 80, left hemisphere 99.5
2436 Male, age 74, both hemispheres 95.5
1867 Male, age 76, both hemispheres 94.0
1891 Female, age 85, both hemispheres 88.6
2861 Female, age 67, both hemispheres 85.9
2620 Female, age 94, left hemisphere 84.8
Parahippocampal cortex
nTPM: 87.8
1850 Male, age 80, both hemispheres 94.0
1933 Female, age 85, both hemispheres 91.9
2245 Female, age 91, both hemispheres 90.8
1990 Female, age 91, right hemisphere 89.7
2250 Female, age 67, right hemisphere 89.1
2018 Male, age 76, both hemispheres 88.5
2693 Female, age 94, both hemispheres 85.5
2532 Female, age 72, left hemisphere 85.1
2692 Male, age 74, both hemispheres 81.8
2622 Female, age 67, right hemisphere 81.2
Perirhinal gyrus
nTPM: 91.9
1847 Female, age 91, left hemisphere 94.3
2521 Female, age 94, right hemisphere 93.3
1841 Female, age 85, right hemisphere 93.2
1794 Male, age 80, right hemisphere 93.1
2848 Male, age 76, right hemisphere 85.5
Subiculum
nTPM: 88.3
1901 Male, age 80, both hemispheres 91.3
2042 Male, age 76, both hemispheres 89.8
2438 Female, age 94, left hemisphere 89.7
1977 Female, age 85, both hemispheres 89.6
2729 Female, age 91, right hemisphere 85.1
2619 Male, age 74, both hemispheres 84.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 123.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.0
Samples: 197

Max nTPM: 259.2
Min nTPM: 47.8
Std nTPM: 35.0
Median nTPM: 117.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 259.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 245.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 234.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 234.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 227.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 216.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 200.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 196.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 195.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 192.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 189.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 139.2
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 99.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 17.9
Sample A Female 27.7
Sample B Female 21.8
Sample C Male 20.6
Sample D Male 17.9
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 27.4
Min nTPM: 16.9
Sample A Female 23.1
Sample B Female 27.4
Sample C Male 22.6
Sample D Male 16.9
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.7
Sample A Female 25.5
Sample B Female 21.1
Sample C Male 19.7
Sample D Male 21.7
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.6
Sample A Female 20.8
Sample B Female 17.6
Sample C Male 20.6
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 9.7
Sample C Female 10.0
Sample D Female 9.7
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.3
Sample A Male 9.4
Sample B Male 9.3
Sample C Female 11.5
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68795466 Antisense, RP_050118_01_H03, Mouse strain C57BL/6J (56 days, male) 0.5

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